p-value: | 1e-7 |
log p-value: | -1.770e+01 |
Information Content per bp: | 1.594 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 1.21% |
Number of Background Sequences with motif | 0.6 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 47.8 +/- 23.5bp |
Average Position of motif in Background | 77.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.67 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0169.1_Sox15_2/Jaspar
Match Rank: | 1 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TCCAMCTCCATTKACC TNGAATTTCATTNAN- |
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ZNF354C/MA0130.1/Jaspar
Match Rank: | 2 |
Score: | 0.52 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TCCAMCTCCATTKACC ATCCAC----------- |
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PB0030.1_Hnf4a_1/Jaspar
Match Rank: | 3 |
Score: | 0.52 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | TCCAMCTCCATTKACC------- ------NNANTTGACCCCTNNNN |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 4 |
Score: | 0.51 |
Offset: | 11 |
Orientation: | reverse strand |
Alignment: | TCCAMCTCCATTKACC- -----------TGACCT |
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NR2F1/MA0017.2/Jaspar
Match Rank: | 5 |
Score: | 0.50 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | TCCAMCTCCATTKACC---- -------CNNTTGACCTTTG |
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LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer
Match Rank: | 6 |
Score: | 0.50 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TCCAMCTCCATTKACC- -TGACCTNTAGTAACCC |
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Rarg(var.2)/MA0860.1/Jaspar
Match Rank: | 7 |
Score: | 0.49 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TCCAMCTCCATTKACC-- -TGACCTTTCGTGACCTT |
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RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer
Match Rank: | 8 |
Score: | 0.48 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TCCAMCTCCATTKACC- -----TGACCTTGACCT |
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GFY(?)/Promoter/Homer
Match Rank: | 9 |
Score: | 0.48 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TCCAMCTCCATTKACC ----ACTACAATTCCC |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 10 |
Score: | 0.47 |
Offset: | 11 |
Orientation: | reverse strand |
Alignment: | TCCAMCTCCATTKACC--- -----------TGACCYCT |
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