Information for 2-CTTCCCAGRTCAMAGC (Motif 3)

A T G C A G C T A C G T G T A C A G T C G T A C G T C A C T A G T C A G C G A T A G T C G T C A T G A C G T C A A C T G A G T C
Reverse Opposite:
C T A G G T A C A C G T A C T G A C G T A C T G G C T A A G T C A G T C A C G T A C T G A C T G A C T G G T C A C T G A A T C G
p-value:1e-13
log p-value:-3.080e+01
Information Content per bp:1.716
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif4.05%
Number of Background Sequences with motif12.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.1 +/- 23.9bp
Average Position of motif in Background50.1 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTTCCCAGRTCAMAGC
HTTTCCCASG-------
 A C G T A T G C A G C T A C G T G T A C A G T C G T A C G T C A C T A G T C A G C G A T A G T C G T C A T G A C G T C A A C T G A G T C
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CTTCCCAGRTCAMAGC-
------AAATCACAGCA
 A T G C A G C T A C G T G T A C A G T C G T A C G T C A C T A G T C A G C G A T A G T C G T C A T G A C G T C A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CTTCCCAGRTCAMAGC
------ACATCAAAGG
 A T G C A G C T A C G T G T A C A G T C G T A C G T C A C T A G T C A G C G A T A G T C G T C A T G A C G T C A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CTTCCCAGRTCAMAGC--
------ACATCAAAGGNA
 A T G C A G C T A C G T G T A C A G T C G T A C G T C A C T A G T C A G C G A T A G T C G T C A T G A C G T C A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTTCCCAGRTCAMAGC
--BTCAAGGTCA----
 A T G C A G C T A C G T G T A C A G T C G T A C G T C A C T A G T C A G C G A T A G T C G T C A T G A C G T C A A C T G A G T C
A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTTCCCAGRTCAMAGC
-TGCCCAGNHW-----
 A T G C A G C T A C G T G T A C A G T C G T A C G T C A C T A G T C A G C G A T A G T C G T C A T G A C G T C A A C T G A G T C
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTTCCCAGRTCAMAGC
TTTCCCAGAAN-----
 A T G C A G C T A C G T G T A C A G T C G T A C G T C A C T A G T C A G C G A T A G T C G T C A T G A C G T C A A C T G A G T C
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTTCCCAGRTCAMAGC
--NTCAAGGTCA----
 A T G C A G C T A C G T G T A C A G T C G T A C G T C A C T A G T C A G C G A T A G T C G T C A T G A C G T C A A C T G A G T C
A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CTTCCCAGRTCAMAGC
------AAATCACTGC
 A T G C A G C T A C G T G T A C A G T C G T A C G T C A C T A G T C A G C G A T A G T C G T C A T G A C G T C A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CTTCCCAGRTCAMAGC----
---NNNAGATCAAAGGANNN
 A T G C A G C T A C G T G T A C A G T C G T A C G T C A C T A G T C A G C G A T A G T C G T C A T G A C G T C A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T