Information for 2-KTAACTTTCAGTC (Motif 6)

A C T G A C G T C G T A T C G A A G T C C G A T C G A T A C G T A T G C C G T A A C T G A C G T A T G C
Reverse Opposite:
A T C G C G T A A G T C C G A T A T C G T C G A C G T A C G T A A C T G A G C T G C A T C G T A G T A C
p-value:1e-11
log p-value:-2.650e+01
Information Content per bp:1.784
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.78%
Number of Background Sequences with motif24.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets47.8 +/- 29.9bp
Average Position of motif in Background54.6 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0168.1_Hnf1b/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----KTAACTTTCAGTC
AGCTGTTAACTAGCCGT-
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A T C G A A G T C C G A T C G A T A C G T A T G C C G T A A C T G A C G T A T G C
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:KTAACTTTCAGTC
---ACTTCCTGTT
 A C T G A C G T C G T A T C G A A G T C C G A T C G A T A C G T A T G C C G T A A C T G A C G T A T G C
A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:KTAACTTTCAGTC--
---ACTTTCACTTTC
 A C T G A C G T C G T A T C G A A G T C C G A T C G A T A C G T A T G C C G T A A C T G A C G T A T G C A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:KTAACTTTCAGTC---
-TCACTTTCACTTTCN
 A C T G A C G T C G T A T C G A A G T C C G A T C G A T A C G T A T G C C G T A A C T G A C G T A T G C A C G T A C G T A C G T
A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--KTAACTTTCAGTC-
GGGTTACTANAGGTCA
 A C G T A C G T A C T G A C G T C G T A T C G A A G T C C G A T C G A T A C G T A T G C C G T A A C T G A C G T A T G C A C G T
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:KTAACTTTCAGTC--
---NCTGTCAATCAN
 A C T G A C G T C G T A T C G A A G T C C G A T C G A T A C G T A T G C C G T A A C T G A C G T A T G C A C G T A C G T
A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

HMBOX1/MA0895.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-KTAACTTTCAGTC
GTTAACTAGN----
 A C G T A C T G A C G T C G T A T C G A A G T C C G A T C G A T A C G T A T G C C G T A A C T G A C G T A T G C
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T A C G T

ELK1/MA0028.2/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:KTAACTTTCAGTC
--NACTTCCGGT-
 A C T G A C G T C G T A T C G A A G T C C G A T C G A T A C G T A T G C C G T A A C T G A C G T A T G C
A C G T A C G T G A T C T C G A A G T C C G A T A C G T T G A C T G A C A C T G A T C G G A C T A C G T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:KTAACTTTCAGTC
---ACTTCCGGTT
 A C T G A C G T C G T A T C G A A G T C C G A T C G A T A C G T A T G C C G T A A C T G A C G T A T G C
A C G T A C G T A C G T T C G A A G T C G C A T C G A T A G T C A G T C A C T G A T C G G A C T A G C T

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:KTAACTTTCAGTC
---ACTTCCGGTN
 A C T G A C G T C G T A T C G A A G T C C G A T C G A T A C G T A T G C C G T A A C T G A C G T A T G C
A C G T A C G T A C G T T C G A A G T C G C A T G C A T A T G C A G T C A C T G A T C G A G C T A G C T