Information for 1-GATTGTTACC (Motif 5)

A C T G C G T A C A G T A C G T C T A G C A G T A G C T T C G A A G T C G T A C
Reverse Opposite:
A C T G A C T G A G C T C T G A G T C A A G T C C G T A G T C A A C G T G T A C
p-value:1e-11
log p-value:-2.722e+01
Information Content per bp:1.762
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif4.86%
Number of Background Sequences with motif160.6
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets60.2 +/- 23.4bp
Average Position of motif in Background46.3 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GATTGTTACC
-ATTGTTA--
 A C T G C G T A C A G T A C G T C T A G C A G T A G C T T C G A A G T C G T A C
A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GATTGTTACC
-ATTGTT---
 A C T G C G T A C A G T A C G T C T A G C A G T A G C T T C G A A G T C G T A C
A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GATTGTTACC-
NNANTGATTGATNNNN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C A G T A C G T C T A G C A G T A G C T T C G A A G T C G T A C A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

PB0144.1_Lef1_2/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GATTGTTACC-
NNANTGATTGATNTTN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C A G T A C G T C T A G C A G T A G C T T C G A A G T C G T A C A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

SRY/MA0084.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GATTGTTACC
-ATTGTTTAN
 A C T G C G T A C A G T A C G T C T A G C A G T A G C T T C G A A G T C G T A C
A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GATTGTTACC
TTGATTGN----
 A C G T A C G T A C T G C G T A C A G T A C G T C T A G C A G T A G C T T C G A A G T C G T A C
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GATTGTTACC-----
AATNTTGATACCCTATN
 A C G T A C G T A C T G C G T A C A G T A C G T C T A G C A G T A G C T T C G A A G T C G T A C A C G T A C G T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

PB0072.1_Sox5_1/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GATTGTTACC--
NNTTTATTGTTCTNNN
 A C G T A C G T A C G T A C G T A C T G C G T A C A G T A C G T C T A G C A G T A G C T T C G A A G T C G T A C A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PBX1/MA0070.1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GATTGTTACC
TTTGATTGATGN-
 A C G T A C G T A C G T A C T G C G T A C A G T A C G T C T A G C A G T A G C T T C G A A G T C G T A C
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GATTGTTACC-
ANNTCCATTGTTCNNN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C A G T A C G T C T A G C A G T A G C T T C G A A G T C G T A C A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T