Information for 21-GGGACAGACTGTGTAG (Motif 36)

A C T G A C T G A C T G C G T A A T G C C G T A A C T G C T G A G A T C A C G T A C T G A C G T A C T G G A C T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A G T C C G T A A G T C C G T A C T A G A G C T A G T C A C G T A T C G A C G T A G T C A G T C A G T C
p-value:1e-4
log p-value:-1.098e+01
Information Content per bp:1.939
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.2 +/- 24.4bp
Average Position of motif in Background81.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGGACAGACTGTGTAG
VAGRACAKNCTGTBC--
 A C G T A C T G A C T G A C T G C G T A A T G C C G T A A C T G C T G A G A T C A C G T A C T G A C G T A C T G G A C T C G T A A C T G
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGGACAGACTGTGTAG
AGNACANNNTGTNCTN
 A C T G A C T G A C T G C G T A A T G C C G T A A C T G C T G A G A T C A C G T A C T G A C G T A C T G G A C T C G T A A C T G
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGGACAGACTGTGTAG
NAGAACAGNCTGTNCT-
 A C G T A C T G A C T G A C T G C G T A A T G C C G T A A C T G C T G A G A T C A C G T A C T G A C G T A C T G G A C T C G T A A C T G
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGGACAGACTGTGTAG
-GRACAGWMTGTYCTB
 A C T G A C T G A C T G C G T A A T G C C G T A A C T G C T G A G A T C A C G T A C T G A C G T A C T G G A C T C G T A A C T G
A C G T C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGGACAGACTGTGTAG
AGGTGNCAGACAG-----
 A C G T A C G T A C T G A C T G A C T G C G T A A T G C C G T A A C T G C T G A G A T C A C G T A C T G A C G T A C T G G A C T C G T A A C T G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGGACAGACTGTGTAG
AAGAACATWHTGTTC--
 A C G T A C T G A C T G A C T G C G T A A T G C C G T A A C T G C T G A G A T C A C G T A C T G A C G T A C T G G A C T C G T A A C T G
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGGACAGACTGTGTAG
AGGTGHCAGACA------
 A C G T A C G T A C T G A C T G A C T G C G T A A T G C C G T A A C T G C T G A G A T C A C G T A C T G A C G T A C T G G A C T C G T A A C T G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GGGACAGACTGTGTAG
CCAGGAACAG---------
 A C G T A C G T A C G T A C T G A C T G A C T G C G T A A T G C C G T A A C T G C T G A G A T C A C G T A C T G A C G T A C T G G A C T C G T A A C T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GGGACAGACTGTGTAG
ARGAGGMCAAAATGW----
 A C G T A C G T A C G T A C T G A C T G A C T G C G T A A T G C C G T A A C T G C T G A G A T C A C G T A C T G A C G T A C T G G A C T C G T A A C T G
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T A C G T A C G T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GGGACAGACTGTGTAG
GGGAACACAATGTTCCC
 A C G T A C T G A C T G A C T G C G T A A T G C C G T A A C T G C T G A G A T C A C G T A C T G A C G T A C T G G A C T C G T A A C T G
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C