Information for 1-GCCCTGGATGGCGCTG (Motif 1)

A C T G A G T C A G T C A G T C C G A T C T A G A T C G C T G A A C G T C T A G A C T G G T A C A C T G A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G G T A C A C T G A G T C A G T C G T C A A G C T A T G C A G T C C G T A C T A G C T A G A C T G A G T C
p-value:1e-16
log p-value:-3.746e+01
Information Content per bp:1.823
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.4 +/- 28.0bp
Average Position of motif in Background51.3 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCCCTGGATGGCGCTG-
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C C G A T C T A G A T C G C T G A A C G T C T A G A C T G G T A C A C T G A G T C A C G T A C T G A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GCCCTGGATGGCGCTG--
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C C G A T C T A G A T C G C T G A A C G T C T A G A C T G G T A C A C T G A G T C A C G T A C T G A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GCCCTGGATGGCGCTG-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C C G A T C T A G A T C G C T G A A C G T C T A G A C T G G T A C A C T G A G T C A C G T A C T G A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.51
Offset:11
Orientation:reverse strand
Alignment:GCCCTGGATGGCGCTG
-----------NGCTN
 A C T G A G T C A G T C A G T C C G A T C T A G A T C G C T G A A C G T C T A G A C T G G T A C A C T G A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.51
Offset:12
Orientation:forward strand
Alignment:GCCCTGGATGGCGCTG--
------------GCTGTG
 A C T G A G T C A G T C A G T C C G A T C T A G A T C G C T G A A C G T C T A G A C T G G T A C A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GCCCTGGATGGCGCTG----
---NNNNTTGGCGCCGANNN
 A C T G A G T C A G T C A G T C C G A T C T A G A T C G C T G A A C G T C T A G A C T G G T A C A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTGGATGGCGCTG---
GCCASCAGGGGGCGCYVNNG
 A C G T A C T G A G T C A G T C A G T C C G A T C T A G A T C G C T G A A C G T C T A G A C T G G T A C A C T G A G T C A C G T A C T G A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:8
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GCCCTGGATGGCGCTG
-NNVDGGGYGGGGCYN
 A C T G A G T C A G T C A G T C C G A T C T A G A T C G C T G A A C G T C T A G A C T G G T A C A C T G A G T C A C G T A C T G
A C G T T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:GCCCTGGATGGCGCTG----
---NNNNTTGGCGCCGANNN
 A C T G A G T C A G T C A G T C C G A T C T A G A T C G C T G A A C G T C T A G A C T G G T A C A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---GCCCTGGATGGCGCTG
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C C G A T C T A G A T C G C T G A A C G T C T A G A C T G G T A C A C T G A G T C A C G T A C T G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A