Information for 9-RCAGAGYTGWCAACAA (Motif 9)

T C A G G T A C C G T A A C T G G T C A A C T G A G T C C G A T A T C G G C T A T A G C C G T A C G T A G T A C C T G A G C T A
Reverse Opposite:
C A G T A G C T A C T G A C G T A C G T A T C G C G A T A T G C C G T A T C A G G T A C A C G T A G T C A C G T A C T G A G T C
p-value:1e-11
log p-value:-2.669e+01
Information Content per bp:1.684
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif18.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets44.2 +/- 21.7bp
Average Position of motif in Background55.6 +/- 35.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:RCAGAGYTGWCAACAA
----ARNTGACA----
 T C A G G T A C C G T A A C T G G T C A A C T G A G T C C G A T A T C G G C T A T A G C C G T A C G T A G T A C C T G A G C T A
A C G T A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:RCAGAGYTGWCAACAA-
-----SCTGTCARCACC
 T C A G G T A C C G T A A C T G G T C A A C T G A G T C C G A T A T C G G C T A T A G C C G T A C G T A G T A C C T G A G C T A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

PH0102.1_Meis1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:RCAGAGYTGWCAACAA
AACGAGCTGTCAATAC
 T C A G G T A C C G T A A C T G G T C A A C T G A G T C C G A T A T C G G C T A T A G C C G T A C G T A G T A C C T G A G C T A
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0170.1_Tgif2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:RCAGAGYTGWCAACAA
AACTAGCTGTCAATAC
 T C A G G T A C C G T A A C T G G T C A A C T G A G T C C G A T A T C G G C T A T A G C C G T A C G T A G T A C C T G A G C T A
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:RCAGAGYTGWCAACAA
-----RHTGWCAR---
 T C A G G T A C C G T A A C T G G T C A A C T G A G T C C G A T A T C G G C T A T A G C C G T A C G T A G T A C C T G A G C T A
A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:RCAGAGYTGWCAACAA
----VGCTGWCAVB--
 T C A G G T A C C G T A A C T G G T C A A C T G A G T C C G A T A T C G G C T A T A G C C G T A C G T A G T A C C T G A G C T A
A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:RCAGAGYTGWCAACAA
AAAGACCTGTCAATAC
 T C A G G T A C C G T A A C T G G T C A A C T G A G T C C G A T A T C G G C T A T A G C C G T A C G T A G T A C C T G A G C T A
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

PH0105.1_Meis3/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:RCAGAGYTGWCAACAA
AATTACCTGTCAATAC
 T C A G G T A C C G T A A C T G G T C A A C T G A G T C C G A T A T C G G C T A T A G C C G T A C G T A G T A C C T G A G C T A
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PH0140.1_Pknox1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:RCAGAGYTGWCAACAA
AAAGACCTGTCAATCC
 T C A G G T A C C G T A A C T G G T C A A C T G A G T C C G A T A T C G G C T A T A G C C G T A C G T A G T A C C T G A G C T A
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:RCAGAGYTGWCAACAA-
NNNCAGCTGTCAATATN
 T C A G G T A C C G T A A C T G G T C A A C T G A G T C C G A T A T C G G C T A T A G C C G T A C G T A G T A C C T G A G C T A A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C