p-value: | 1e-5 |
log p-value: | -1.295e+01 |
Information Content per bp: | 1.954 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.50% |
Number of Background Sequences with motif | 2.4 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 56.0 +/- 24.0bp |
Average Position of motif in Background | 62.5 +/- 11.5bp |
Strand Bias (log2 ratio + to - strand density) | 2.8 |
Multiplicity (# of sites on avg that occur together) | 2.67 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0205.1_Zic1_2/Jaspar
Match Rank: | 1 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CACAACAGGAGAGATC CCACACAGCAGGAGA---- |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 2 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CACAACAGGAGAGATC CACAGCAGGGGG---- |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CACAACAGGAGAGATC GAGCACAGCAGGACA---- |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CACAACAGGAGAGATC CCACACAGCAGGAGA---- |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 5 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CACAACAGGAGAGATC DCHCAGCAGGRGGCC-- |
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PB0126.1_Gata5_2/Jaspar
Match Rank: | 6 |
Score: | 0.53 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CACAACAGGAGAGATC----- ----GACAGAGATATCAGTGT |
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PB0120.1_Foxj1_2/Jaspar
Match Rank: | 7 |
Score: | 0.53 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CACAACAGGAGAGATC ATGTCACAACAACAC----- |
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ZEB1/MA0103.2/Jaspar
Match Rank: | 8 |
Score: | 0.51 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CACAACAGGAGAGATC -----CAGGTGAGG-- |
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SCRT2/MA0744.1/Jaspar
Match Rank: | 9 |
Score: | 0.51 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CACAACAGGAGAGATC ATGCAACAGGTGG---- |
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SCRT1/MA0743.1/Jaspar
Match Rank: | 10 |
Score: | 0.50 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CACAACAGGAGAGATC GAGCAACAGGTGGTT-- |
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