Information for 21-GATGGTGCTGAGSANA (Motif 27)

C T A G G C T A A C G T A C T G T C A G C G A T A T C G A G T C C G A T C T A G C T G A A C T G T A C G G T C A A G C T T C G A
Reverse Opposite:
A G C T T C G A C A G T A T G C G T A C G A C T A G T C G C T A T C A G T A G C C G T A A G T C A G T C G T C A C G A T A G T C
p-value:1e-7
log p-value:-1.637e+01
Information Content per bp:1.613
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif5.86%
Number of Background Sequences with motif1018.7
Percentage of Background Sequences with motif2.08%
Average Position of motif in Targets59.2 +/- 22.8bp
Average Position of motif in Background50.3 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----GATGGTGCTGAGSANA
NNNNAGCAGCTGCTGAN----
 A C G T A C G T A C G T A C G T A C G T C T A G G C T A A C G T A C T G T C A G C G A T A T C G A G T C C G A T C T A G C T G A A C T G T A C G G T C A A G C T T C G A
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GATGGTGCTGAGSANA
-CTGTTGCTAGGS---
 C T A G G C T A A C G T A C T G T C A G C G A T A T C G A G T C C G A T C T A G C T G A A C T G T A C G G T C A A G C T T C G A
A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:3
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----GATGGTGCTGAGSANA
NNANTGGTGGTCTTNNN----
 A C G T A C G T A C G T A C G T A C G T C T A G G C T A A C G T A C T G T C A G C G A T A T C G A G T C C G A T C T A G C T G A A C T G T A C G G T C A A G C T T C G A
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:4
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GATGGTGCTGAGSANA
AGATGCTRCTRCCHT--
 A C G T C T A G G C T A A C G T A C T G T C A G C G A T A T C G A G T C C G A T C T A G C T G A A C T G T A C G G T C A A G C T T C G A
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--GATGGTGCTGAGSANA
SDGCAGGTGCNS------
 A C G T A C G T C T A G G C T A A C G T A C T G T C A G C G A T A T C G A G T C C G A T C T A G C T G A A C T G T A C G G T C A A G C T T C G A
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:6
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:GATGGTGCTGAGSANA-
--KGTTGCTAGGMAACA
 C T A G G C T A A C G T A C T G T C A G C G A T A T C G A G T C C G A T C T A G C T G A A C T G T A C G G T C A A G C T T C G A A C G T
A C G T A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

PH0158.1_Rhox11_2/Jaspar

Match Rank:7
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--GATGGTGCTGAGSANA
AGGACGCTGTAAAGGGA-
 A C G T A C G T C T A G G C T A A C G T A C T G T C A G C G A T A T C G A G T C C G A T C T A G C T G A A C T G T A C G G T C A A G C T T C G A
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:8
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--GATGGTGCTGAGSANA
AAGACGCTGTAAAGCGA-
 A C G T A C G T C T A G G C T A A C G T A C T G T C A G C G A T A T C G A G T C C G A T C T A G C T G A A C T G T A C G G T C A A G C T T C G A
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:9
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--GATGGTGCTGAGSANA
AAGACGCTGTAAAGCGA-
 A C G T A C G T C T A G G C T A A C G T A C T G T C A G C G A T A T C G A G T C C G A T C T A G C T G A A C T G T A C G G T C A A G C T T C G A
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.47
Offset:1
Orientation:forward strand
Alignment:GATGGTGCTGAGSANA
-AATTTGCTGAC----
 C T A G G C T A A C G T A C T G T C A G C G A T A T C G A G T C C G A T C T A G C T G A A C T G T A C G G T C A A G C T T C G A
A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T