Information for 1-ATGCTCCTAA (Motif 20)

G C T A G A C T C A T G A G T C G C A T A T G C G T A C G C A T T C G A T C G A
Reverse Opposite:
A G C T A G C T C G T A C A T G T A C G C G T A T C A G G T A C C T G A C G A T
p-value:1e-8
log p-value:-1.930e+01
Information Content per bp:1.664
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif5.70%
Number of Background Sequences with motif858.4
Percentage of Background Sequences with motif1.76%
Average Position of motif in Targets45.9 +/- 24.4bp
Average Position of motif in Background51.9 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ATGCTCCTAA
--GCTCCG--
 G C T A G A C T C A T G A G T C G C A T A T G C G T A C G C A T T C G A T C G A
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATGCTCCTAA
CNGTCCTCCC--
 A C G T A C G T G C T A G A C T C A T G A G T C G C A T A T G C G T A C G C A T T C G A T C G A
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATGCTCCTAA-----
AAAGCTCGTAAAATTT
 A C G T G C T A G A C T C A T G A G T C G C A T A T G C G T A C G C A T T C G A T C G A A C G T A C G T A C G T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATGCTCCTAA----
ACATGCTACCTAATAC
 A C G T A C G T G C T A G A C T C A T G A G T C G C A T A T G C G T A C G C A T T C G A T C G A A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------ATGCTCCTAA-
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A G A C T C A T G A G T C G C A T A T G C G T A C G C A T T C G A T C G A A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PH0048.1_Hoxa13/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATGCTCCTAA-----
AAACCTCGTAAAATTT
 A C G T G C T A G A C T C A T G A G T C G C A T A T G C G T A C G C A T T C G A T C G A A C G T A C G T A C G T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ATGCTCCTAA---
--GCTCGTAAAAA
 G C T A G A C T C A T G A G T C G C A T A T G C G T A C G C A T T C G A T C G A A C G T A C G T A C G T
A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATGCTCCTAA----
ACTTGCTACCTACACC
 A C G T A C G T G C T A G A C T C A T G A G T C G C A T A T G C G T A C G C A T T C G A T C G A A C G T A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATGCTCCTAA
-NGCTN----
 G C T A G A C T C A T G A G T C G C A T A T G C G T A C G C A T T C G A T C G A
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ATGCTCCTAA---
AGATGCTRCTRCCHT
 A C G T A C G T G C T A G A C T C A T G A G T C G C A T A T G C G T A C G C A T T C G A T C G A A C G T A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T