Information for 15-GAGVTCTCAGAGGACA (Motif 18)

A T C G C G T A A C T G T A C G A C G T A T G C G C A T A G T C C G T A A C T G C G T A A C T G A C T G C T G A A G T C C G T A
Reverse Opposite:
A C G T A C T G A G C T A G T C G T A C A C G T G T A C C G A T A C T G C G T A A T C G C G T A A G T C A G T C A C G T A T G C
p-value:1e-9
log p-value:-2.082e+01
Information Content per bp:1.817
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.8 +/- 31.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAGVTCTCAGAGGACA---
NGAGGTCANNGAGTTCANNN
 A C G T A T C G C G T A A C T G T A C G A C G T A T G C G C A T A G T C C G T A A C T G C G T A A C T G A C T G C T G A A G T C C G T A A C G T A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.59
Offset:7
Orientation:forward strand
Alignment:GAGVTCTCAGAGGACA-
-------CAAAGGTCAG
 A T C G C G T A A C T G T A C G A C G T A T G C G C A T A G T C C G T A A C T G C G T A A C T G A C T G C T G A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

NR2C2/MA0504.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAGVTCTCAGAGGACA
-AGGGGTCAGAGGTCA
 A T C G C G T A A C T G T A C G A C G T A T G C G C A T A G T C C G T A A C T G C G T A A C T G A C T G C T G A A G T C C G T A
A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.58
Offset:8
Orientation:forward strand
Alignment:GAGVTCTCAGAGGACA
--------TRAGGTCA
 A T C G C G T A A C T G T A C G A C G T A T G C G C A T A G T C C G T A A C T G C G T A A C T G A C T G C T G A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAGVTCTCAGAGGACA
--GAGGTCAAAGGTCA
 A T C G C G T A A C T G T A C G A C G T A T G C G C A T A G T C C G T A A C T G C G T A A C T G A C T G C T G A A G T C C G T A
A C G T A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

PB0126.1_Gata5_2/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GAGVTCTCAGAGGACA
GACAGAGATATCAGTGT---
 A C G T A C G T A C G T A C G T A T C G C G T A A C T G T A C G A C G T A T G C G C A T A G T C C G T A A C T G C G T A A C T G A C T G C T G A A G T C C G T A
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T A C G T A C G T A C G T

Vdr/MA0693.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAGVTCTCAGAGGACA
GAGTTCATTGAGTTCA
 A T C G C G T A A C T G T A C G A C G T A T G C G C A T A G T C C G T A A C T G C G T A A C T G A C T G C T G A A G T C C G T A
T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:GAGVTCTCAGAGGACA
--------ARNTGACA
 A T C G C G T A A C T G T A C G A C G T A T G C G C A T A G T C C G T A A C T G C G T A A C T G A C T G C T G A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A

Rxra/MA0512.2/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GAGVTCTCAGAGGACA
--GGGGTCAAAGGTCA
 A T C G C G T A A C T G T A C G A C G T A T G C G C A T A G T C C G T A A C T G C G T A A C T G A C T G C T G A A G T C C G T A
A C G T A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRB/MA0855.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GAGVTCTCAGAGGACA
--GGGGTCAAAGGTCA
 A T C G C G T A A C T G T A C G A C G T A T G C G C A T A G T C C G T A A C T G C G T A A C T G A C T G C T G A A G T C C G T A
A C G T A C G T T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A