Information for 10-GGGAAGACWGAGTGAC (Motif 10)

C T A G C A T G C T A G C T G A C G T A C T A G C T G A T G A C G C A T A T C G C T G A A T C G A C G T T A C G T C G A T A G C
Reverse Opposite:
A C T G A C G T A T G C G T C A A T G C G A C T A T G C C G T A A C T G G A C T A G T C C G A T A G C T A G T C G A T C G A T C
p-value:1e-10
log p-value:-2.430e+01
Information Content per bp:1.673
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif61.2
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets51.5 +/- 27.1bp
Average Position of motif in Background49.9 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR2/MA0258.2/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GGGAAGACWGAGTGAC--
---AGGNCANNGTGACCT
 C T A G C A T G C T A G C T G A C G T A C T A G C T G A T G A C G C A T A T C G C T G A A T C G A C G T T A C G T C G A T A G C A C G T A C G T
A C G T A C G T A C G T C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGGAAGACWGAGTGAC
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T A C G T C T A G C A T G C T A G C T G A C G T A C T A G C T G A T G A C G C A T A T C G C T G A A T C G A C G T T A C G T C G A T A G C
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GGGAAGACWGAGTGAC---
-------BTGABTGACAGS
 C T A G C A T G C T A G C T G A C G T A C T A G C T G A T G A C G C A T A T C G C T G A A T C G A C G T T A C G T C G A T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GGGAAGACWGAGTGAC---
-------NTGATTGACAGN
 C T A G C A T G C T A G C T G A C G T A C T A G C T G A T G A C G C A T A T C G C T G A A T C G A C G T T A C G T C G A T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGGAAGACWGAGTGAC
--TCAGNGAGCGTGAC
 C T A G C A T G C T A G C T G A C G T A C T A G C T G A T G A C G C A T A T C G C T G A A T C G A C G T T A C G T C G A T A G C
A C G T A C G T A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GGGAAGACWGAGTGAC----
----TGACCCAGTGACCTAC
 C T A G C A T G C T A G C T G A C G T A C T A G C T G A T G A C G C A T A T C G C T G A A T C G A C G T T A C G T C G A T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:7
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:GGGAAGACWGAGTGAC----
--------TGAGTGACAGSC
 C T A G C A T G C T A G C T G A C G T A C T A G C T G A T G A C G C A T A T C G C T G A A T C G A C G T T A C G T C G A T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGGAAGACWGAGTGAC
-NGAAGC---------
 C T A G C A T G C T A G C T G A C G T A C T A G C T G A T G A C G C A T A T C G C T G A A T C G A C G T T A C G T C G A T A G C
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GGGAAGACWGAGTGAC-
--NAGGTCACNNTGACC
 C T A G C A T G C T A G C T G A C G T A C T A G C T G A T G A C G C A T A T C G C T G A A T C G A C G T T A C G T C G A T A G C A C G T
A C G T A C G T T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:GGGAAGACWGAGTGAC-
---------NCGTGACN
 C T A G C A T G C T A G C T G A C G T A C T A G C T G A T G A C G C A T A T C G C T G A A T C G A C G T T A C G T C G A T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T