Information for 1-CACTGAGGTT (Motif 1)

A T G C G T C A A G T C A C G T C A T G C T G A A C T G A T C G A C G T C G A T
Reverse Opposite:
G C T A G T C A A T G C A G T C A G C T G A T C C G T A A C T G A C G T A T C G
p-value:1e-12
log p-value:-2.952e+01
Information Content per bp:1.850
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.65%
Number of Background Sequences with motif158.1
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets45.2 +/- 22.7bp
Average Position of motif in Background47.3 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CACTGAGGTT--
--CTGTGGTTTN
 A T G C G T C A A G T C A C G T C A T G C T G A A C T G A T C G A C G T C G A T A C G T A C G T
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CACTGAGGTT-
-GCTGTGGTTT
 A T G C G T C A A G T C A C G T C A T G C T G A A C T G A T C G A C G T C G A T A C G T
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CACTGAGGTT-
GTCTGTGGTTT
 A T G C G T C A A G T C A C G T C A T G C T G A A C T G A T C G A C G T C G A T A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CACTGAGGTT-
-NNTGTGGTTT
 A T G C G T C A A G T C A C G T C A T G C T G A A C T G A T C G A C G T C G A T A C G T
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CACTGAGGTT-
--TTGCGGTTT
 A T G C G T C A A G T C A C G T C A T G C T G A A C T G A T C G A C G T C G A T A C G T
A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

NKX3-2/MA0122.2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CACTGAGGTT
ACCACTTAA---
 A C G T A C G T A T G C G T C A A G T C A C G T C A T G C T G A A C T G A T C G A C G T C G A T
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CACTGAGGTT
ACCACTTAA---
 A C G T A C G T A T G C G T C A A G T C A C G T C A T G C T G A A C T G A T C G A C G T C G A T
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CACTGAGGTT
ATGCCCTGAGGC-
 A C G T A C G T A C G T A T G C G T C A A G T C A C G T C A T G C T G A A C T G A T C G A C G T C G A T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CACTGAGGTT-
TGCTGTGATTT
 A T G C G T C A A G T C A C G T C A T G C T G A A C T G A T C G A C G T C G A T A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CACTGAGGTT
MRSCACTYAA---
 A C G T A C G T A C G T A T G C G T C A A G T C A C G T C A T G C T G A A C T G A T C G A C G T C G A T
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T