Information for 1-CTGAAAGTCA (Motif 8)

A G T C C G A T C T A G C G T A G T C A C G T A A C T G C A G T A T G C G T C A
Reverse Opposite:
A C G T A T C G G T C A G T A C A C G T A C G T A C G T A G T C C G T A A C T G
p-value:1e-10
log p-value:-2.386e+01
Information Content per bp:1.866
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif155.2
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets42.3 +/- 28.7bp
Average Position of motif in Background48.1 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CTGAAAGTCA-
--AAAAGTCAA
 A G T C C G A T C T A G C G T A G T C A C G T A A C T G C A G T A T G C G T C A A C G T
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

Esrrg/MA0643.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTGAAAGTCA-
-TCAAGGTCAT
 A G T C C G A T C T A G C G T A G T C A C G T A A C T G C A G T A T G C G T C A A C G T
A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

ESRRB/MA0141.3/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTGAAAGTCA--
-TCAAGGTCATA
 A G T C C G A T C T A G C G T A G T C A C G T A A C T G C A G T A T G C G T C A A C G T A C G T
A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTGAAAGTCA
GAAAGTGAAAGT--
 A C G T A C G T A C G T A C G T A G T C C G A T C T A G C G T A G T C A C G T A A C T G C A G T A T G C G T C A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGAAAGTCA-
-TCAAGGTCAN
 A G T C C G A T C T A G C G T A G T C A C G T A A C T G C A G T A T G C G T C A A C G T
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTGAAAGTCA
ACTGAAACCA-
 A C G T A G T C C G A T C T A G C G T A G T C A C G T A A C T G C A G T A T G C G T C A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTGAAAGTCA
GSCTGTCACTCA
 A C G T A C G T A G T C C G A T C T A G C G T A G T C A C G T A A C T G C A G T A T G C G T C A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

PRDM1/MA0508.1/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CTGAAAGTCA
AGAAAGTGAAAGTGA
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T C T A G C G T A G T C A C G T A A C T G C A G T A T G C G T C A
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTGAAAGTCA-
NCTGTCAATCAN
 A C G T A G T C C G A T C T A G C G T A G T C A C G T A A C T G C A G T A T G C G T C A A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTGAAAGTCA-
SCTGTCAVTCAV
 A C G T A G T C C G A T C T A G C G T A G T C A C G T A A C T G C A G T A T G C G T C A A C G T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A