Information for 3-TCGCGGACTCGCC (Motif 3)

A C G T A T G C A C T G A G T C A C T G A C T G C T G A A G T C A C G T G T A C C T A G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C T G C G T A A C T G A G C T A G T C G T A C A C T G A G T C A T C G C G T A
p-value:1e-13
log p-value:-3.116e+01
Information Content per bp:1.925
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 20.6bp
Average Position of motif in Background28.7 +/- 5.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCGCGGACTCGCC
NCGCGGACGTTG-
 A C G T A T G C A C T G A G T C A C T G A C T G C T G A A G T C A C G T G T A C C T A G A G T C A G T C
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCGCGGACTCGCC
-TGCTGACTCA--
 A C G T A T G C A C T G A G T C A C T G A C T G C T G A A G T C A C G T G T A C C T A G A G T C A G T C
A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCGCGGACTCGCC-
-AGGGGATTCCCCT
 A C G T A T G C A C T G A G T C A C T G A C T G C T G A A G T C A C G T G T A C C T A G A G T C A G T C A C G T
A C G T T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCGCGGACTCGCC
GCTCGGSCTC---
 A C G T A T G C A C T G A G T C A C T G A C T G C T G A A G T C A C G T G T A C C T A G A G T C A G T C
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCGCGGACTCGCC--
TCCCAGMCRAGCCCC
 A C G T A T G C A C T G A G T C A C T G A C T G C T G A A G T C A C G T G T A C C T A G A G T C A G T C A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCGCGGACTCGCC-
--GGGGATTCCCCC
 A C G T A T G C A C T G A G T C A C T G A C T G C T G A A G T C A C G T G T A C C T A G A G T C A G T C A C G T
A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TCGCGGACTCGCC----
--NNGGCCACGCCTTTN
 A C G T A T G C A C T G A G T C A C T G A C T G C T G A A G T C A C G T G T A C C T A G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TCGCGGACTCGCC--
----NNACTTGCCTT
 A C G T A T G C A C T G A G T C A C T G A C T G C T G A A G T C A C G T G T A C C T A G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TCGCGGACTCGCC-
-AGGGGATTCCCCT
 A C G T A T G C A C T G A G T C A C T G A C T G C T G A A G T C A C G T G T A C C T A G A G T C A G T C A C G T
A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TCGCGGACTCGCC-
--GCTGASTCAGCA
 A C G T A T G C A C T G A G T C A C T G A C T G C T G A A G T C A C G T G T A C C T A G A G T C A G T C A C G T
A C G T A C G T T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A