Information for 3-GTCAGGAKGGANGAGG (Motif 12)

A T C G C A G T A T G C C G T A A C T G T C A G T G C A A C G T A C T G A C T G C T G A C A G T C A T G C T G A T A C G T A C G
Reverse Opposite:
A T G C A G T C A G C T G A T C G T A C A G C T T A G C T A G C T G C A A C G T A G T C A G T C C G A T A T C G G T C A A T G C
p-value:1e-8
log p-value:-2.018e+01
Information Content per bp:1.679
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif132.0
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets53.3 +/- 21.5bp
Average Position of motif in Background52.3 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:1
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GTCAGGAKGGANGAGG
---GGGCGGGAAGG--
 A T C G C A G T A T G C C G T A A C T G T C A G T G C A A C G T A C T G A C T G C T G A C A G T C A T G C T G A T A C G T A C G
A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GTCAGGAKGGANGAGG----
----NNAGGGACAAGGGCNC
 A T C G C A G T A T G C C G T A A C T G T C A G T G C A A C G T A C T G A C T G C T G A C A G T C A T G C T G A T A C G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GTCAGGAKGGANGAGG-
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A T C G C A G T A T G C C G T A A C T G T C A G T G C A A C G T A C T G A C T G C T G A C A G T C A T G C T G A T A C G T A C G A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GTCAGGAKGGANGAGG
TGAGTCAGCA---------
 A C G T A C G T A C G T A T C G C A G T A T G C C G T A A C T G T C A G T G C A A C G T A C T G A C T G C T G A C A G T C A T G C T G A T A C G T A C G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GTCAGGAKGGANGAGG
TGTCAGGGGGCG-----
 A C G T A T C G C A G T A T G C C G T A A C T G T C A G T G C A A C G T A C T G A C T G C T G A C A G T C A T G C T G A T A C G T A C G
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GTCAGGAKGGANGAGG
--CWGGCGGGAA----
 A T C G C A G T A T G C C G T A A C T G T C A G T G C A A C G T A C T G A C T G C T G A C A G T C A T G C T G A T A C G T A C G
A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.49
Offset:5
Orientation:forward strand
Alignment:GTCAGGAKGGANGAGG-
-----ACAGGATGTGGT
 A T C G C A G T A T G C C G T A A C T G T C A G T G C A A C G T A C T G A C T G C T G A C A G T C A T G C T G A T A C G T A C G A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:8
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GTCAGGAKGGANGAGG
NDCAGGAARTNN----
 A T C G C A G T A T G C C G T A A C T G T C A G T G C A A C G T A C T G A C T G C T G A C A G T C A T G C T G A T A C G T A C G
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GTCAGGAKGGANGAGG
DCTCAGCAGG-------
 A C G T A T C G C A G T A T G C C G T A A C T G T C A G T G C A A C G T A C T G A C T G C T G A C A G T C A T G C T G A T A C G T A C G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:10
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----GTCAGGAKGGANGAGG
GGAAGGAAGGAAGGAAGG--
 A C G T A C G T A C G T A C G T A T C G C A G T A T G C C G T A A C T G T C A G T G C A A C G T A C T G A C T G C T G A C A G T C A T G C T G A T A C G T A C G
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G A C G T A C G T