Information for 10-TCTTACGCWRATC (Motif 16)

A C G T A G T C A C G T C G A T C G T A A T G C C T A G A G T C G C T A T C G A G C T A A C G T A G T C
Reverse Opposite:
A C T G G T C A C G A T A G C T C G A T A C T G A G T C A T C G C G A T G C T A C G T A A C T G C G T A
p-value:1e-9
log p-value:-2.139e+01
Information Content per bp:1.773
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif20.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets61.8 +/- 20.3bp
Average Position of motif in Background69.1 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBPB/MA0466.2/Jaspar

Match Rank:1
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCTTACGCWRATC
-ATTGCGCAAT--
 A C G T A G T C A C G T C G A T C G T A A T G C C T A G A G T C G C T A T C G A G C T A A C G T A G T C
A C G T T C G A G A C T C A G T C T A G G A T C T C A G G T A C T G C A G C T A A G C T A C G T A C G T

CEBPD/MA0836.1/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TCTTACGCWRATC
-ATTGCGCAAT--
 A C G T A G T C A C G T C G A T C G T A A T G C C T A G A G T C G C T A T C G A G C T A A C G T A G T C
A C G T T C G A A C G T A C G T C T A G G A T C T C A G G T A C G T C A C G T A A G C T A C G T A C G T

CEBPE/MA0837.1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TCTTACGCWRATC
-ATTGCGCAAT--
 A C G T A G T C A C G T C G A T C G T A A T G C C T A G A G T C G C T A T C G A G C T A A C G T A G T C
A C G T T C G A G A C T C A G T C T A G G A T C T C A G G T A C G T C A C G T A A G C T A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCTTACGCWRATC
CTTTGTTATGCAAAT-
 A C G T A C G T A C G T A C G T A G T C A C G T C G A T C G T A A T G C C T A G A G T C G C T A T C G A G C T A A C G T A G T C
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TCTTACGCWRATC
AGNGTTCTAATGANN---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G A T C G T A A T G C C T A G A G T C G C T A T C G A G C T A A C G T A G T C
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A A C G T A C G T A C G T

CEBPG/MA0838.1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TCTTACGCWRATC
-ATTGCGCAAT--
 A C G T A G T C A C G T C G A T C G T A A T G C C T A G A G T C G C T A T C G A G C T A A C G T A G T C
A C G T T C G A C A G T C A G T C T A G G A T C C T A G G A T C C T G A C G T A A G C T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TCTTACGCWRATC
TGTCTGDCACCT---
 A C G T A C G T A C G T A G T C A C G T C G A T C G T A A T G C C T A G A G T C G C T A T C G A G C T A A C G T A G T C
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TCTTACGCWRATC
CATTGTTATGCAAAT-
 A C G T A C G T A C G T A C G T A G T C A C G T C G A T C G T A A T G C C T A G A G T C G C T A T C G A G C T A A C G T A G T C
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TCTTACGCWRATC
--TTATGCAAAT-
 A C G T A G T C A C G T C G A T C G T A A T G C C T A G A G T C G C T A T C G A G C T A A C G T A G T C
A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:forward strand
Alignment:TCTTACGCWRATC
TBGCACGCAA---
 A C G T A G T C A C G T C G A T C G T A A T G C C T A G A G T C G C T A T C G A G C T A A C G T A G T C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T