Information for 1-GCTGTAACADCAC (Motif 1)

A T C G A G T C A C G T A C T G A C G T C G T A C G T A A T G C C T G A C G T A A G T C G C T A A T G C
Reverse Opposite:
A T C G C A G T A C T G G A C T A G C T A T C G A C G T A C G T C G T A A G T C C G T A A C T G A T G C
p-value:1e-16
log p-value:-3.855e+01
Information Content per bp:1.846
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.1 +/- 26.2bp
Average Position of motif in Background61.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTAACADCAC
AGGACGCTGTAAAGGGA-
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C G T A C T G A C G T C G T A C G T A A T G C C T G A C G T A A G T C G C T A A T G C
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTAACADCAC
AAGACGCTGTAAAGCGA-
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C G T A C T G A C G T C G T A C G T A A T G C C T G A C G T A A G T C G C T A A T G C
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTAACADCAC
AAGACGCTGTAAAGCGA-
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C G T A C T G A C G T C G T A C G T A A T G C C T G A C G T A A G T C G C T A A T G C
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCTGTAACADCAC
GCTGTG-------
 A T C G A G T C A C G T A C T G A C G T C G T A C G T A A T G C C T G A C G T A A G T C G C T A A T G C
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCTGTAACADCAC
AATGTATCAAT--
 A T C G A G T C A C G T A C T G A C G T C G T A C G T A A T G C C T G A C G T A A G T C G C T A A T G C
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCTGTAACADCAC
--TGGAACAGMA-
 A T C G A G T C A C G T A C T G A C G T C G T A C G T A A T G C C T G A C G T A A G T C G C T A A T G C
A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTGTAACADCAC
GCTGTCAA-----
 A T C G A G T C A C G T A C T G A C G T C G T A C G T A A T G C C T G A C G T A A G T C G C T A A T G C
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCTGTAACADCAC
-CGGTGACGTCAC
 A T C G A G T C A C G T A C T G A C G T C G T A C G T A A T G C C T G A C G T A A G T C G C T A A T G C
A C G T A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCTGTAACADCAC
-CNGTCACGCCAC
 A T C G A G T C A C G T A C T G A C G T C G T A C G T A A T G C C T G A C G T A A G T C G C T A A T G C
A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

PH0170.1_Tgif2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTAACADCAC
AACTAGCTGTCAATAC--
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C G T A C T G A C G T C G T A C G T A A T G C C T G A C G T A A G T C G C T A A T G C
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C A C G T A C G T