Information for 19-AWTCATTTAACTCCTT (Motif 30)

C T G A C G A T G A C T A G T C G C T A A G C T C G A T C A G T G T C A G C T A G A T C C G A T G A T C G T A C C G A T A C G T
Reverse Opposite:
G T C A C G T A C A T G C T A G G C T A C A T G C G A T A C G T G T C A C G T A C T G A C G A T T C A G C G T A G C T A G A C T
p-value:1e-8
log p-value:-1.847e+01
Information Content per bp:1.706
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif25.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets45.1 +/- 19.6bp
Average Position of motif in Background47.6 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:1
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:AWTCATTTAACTCCTT
------TTMACACCTT
 C T G A C G A T G A C T A G T C G C T A A G C T C G A T C A G T G T C A G C T A G A T C C G A T G A T C G T A C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

TBX2/MA0688.1/Jaspar

Match Rank:2
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:AWTCATTTAACTCCTT
-----TTTCACACCTN
 C T G A C G A T G A C T A G T C G C T A A G C T C G A T C A G T G T C A G C T A G A T C C G A T G A T C G T A C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:AWTCATTTAACTCCTT
-----ATTAACACCT-
 C T G A C G A T G A C T A G T C G C T A A G C T C G A T C A G T G T C A G C T A G A T C C G A T G A T C G T A C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:AWTCATTTAACTCCTT
-----TTTCACACCT-
 C T G A C G A T G A C T A G T C G C T A A G C T C G A T C A G T G T C A G C T A G A T C C G A T G A T C G T A C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AWTCATTTAACTCCTT
---NTTTTCACACCTT
 C T G A C G A T G A C T A G T C G C T A A G C T C G A T C A G T G T C A G C T A G A T C C G A T G A T C G T A C C G A T A C G T
A C G T A C G T A C G T C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

PB0013.1_Eomes_1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AWTCATTTAACTCCTT---
--NNTTTTCACACCTTNNN
 C T G A C G A T G A C T A G T C G C T A A G C T C G A T C A G T G T C A G C T A G A T C C G A T G A T C G T A C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

TBX21/MA0690.1/Jaspar

Match Rank:7
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:AWTCATTTAACTCCTT
------TTCACACCTT
 C T G A C G A T G A C T A G T C G C T A A G C T C G A T C A G T G T C A G C T A G A T C C G A T G A T C G T A C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

PH0117.1_Nkx3-1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AWTCATTTAACTCCTT----
---NATTTAAGTACTTANNA
 C T G A C G A T G A C T A G T C G C T A A G C T C G A T C A G T G T C A G C T A G A T C C G A T G A T C G T A C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

TBX20/MA0689.1/Jaspar

Match Rank:9
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AWTCATTTAACTCCTT
-----CTTCACACCTA
 C T G A C G A T G A C T A G T C G C T A A G C T C G A T C A G T G T C A G C T A G A T C C G A T G A T C G T A C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

BARHL2/MA0635.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AWTCATTTAACTCCTT
-ANCGTTTANN-----
 C T G A C G A T G A C T A G T C G C T A A G C T C G A T C A G T G T C A G C T A G A T C C G A T G A T C G T A C C G A T A C G T
A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T A C G T A C G T A C G T A C G T