Information for 19-TGGTGCTHCCTTC (Motif 28)

A C G T A C T G A C T G A C G T C T A G G T A C A C G T G C T A A G T C A G T C A C G T A C G T G T A C
Reverse Opposite:
A C T G C G T A C G T A C T A G C T A G C A G T C G T A A C T G A G T C C G T A G T A C A G T C C G T A
p-value:1e-8
log p-value:-1.888e+01
Information Content per bp:1.823
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif15.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.4 +/- 22.6bp
Average Position of motif in Background43.1 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TGGTGCTHCCTTC
AGATGCTRCTRCCHT-
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T C T A G G T A C A C G T G C T A A G T C A G T C A C G T A C G T G T A C
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T

ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TGGTGCTHCCTTC-------
CCTCATGGTGYCYTWYTCCCTTGTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C T A G G T A C A C G T G C T A A G T C A G T C A C G T A C G T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G A T C A G C T T G A C G C T A A G C T C A T G A C T G A C G T T C A G A G T C G A T C G A C T A G C T G C T A A G T C A G C T A G T C G A T C A T G C A G C T G A C T C A T G A C G T A T C G

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TGGTGCTHCCTTC
NNANTGGTGGTCTTNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C T A G G T A C A C G T G C T A A G T C A G T C A C G T A C G T G T A C
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TGGTGCTHCCTTC--
GNCTGTASTRNTGBCTCHTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C T A G G T A C A C G T G C T A A G T C A G T C A C G T A C G T G T A C A C G T A C G T
C T A G G A C T G A T C A C G T A T C G A G C T C T G A A T C G C G A T C T A G G A T C G A C T C A T G A T C G G T A C G A C T A G T C G C A T A G C T C G A T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGGTGCTHCCTTC
CNGTCCTCCC---
 A C G T A C T G A C T G A C G T C T A G G T A C A C G T G C T A A G T C A G T C A C G T A C G T G T A C
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:6
Score:0.52
Offset:-8
Orientation:forward strand
Alignment:--------TGGTGCTHCCTTC
ACTYKNATTCGTGNTACTTC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C T A G G T A C A C G T G C T A A G T C A G T C A C G T A C G T G T A C
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGGTGCTHCCTTC
CAGCTGTTTCCT--
 A C G T A C G T A C T G A C T G A C G T C T A G G T A C A C G T G C T A A G T C A G T C A C G T A C G T G T A C
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TGGTGCTHCCTTC-
NNGTANTGTTTTNC
 A C G T A C T G A C T G A C G T C T A G G T A C A C G T G C T A A G T C A G T C A C G T A C G T G T A C A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

Six3/MA0631.1/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TGGTGCTHCCTTC--
ANANGTGATACCCTATN
 A C G T A C G T A C G T A C T G A C T G A C G T C T A G G T A C A C G T G C T A A G T C A G T C A C G T A C G T G T A C A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0163.1_Six3/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TGGTGCTHCCTTC--
ANANGTGATACCCTATN
 A C G T A C G T A C G T A C T G A C T G A C G T C T A G G T A C A C G T G C T A A G T C A G T C A C G T A C G T G T A C A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C