Information for 15-TGGSKKGMACCTG (Motif 18)

A C G T A C T G A C T G A T C G C A T G A C T G A C T G G T C A C G T A A G T C A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C T G A C G T A C G T A G T C G T A C G T A C T A G C A G T C A G T C C G T A
p-value:1e-10
log p-value:-2.326e+01
Information Content per bp:1.865
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.7 +/- 32.2bp
Average Position of motif in Background38.4 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SNAI2/MA0745.1/Jaspar

Match Rank:1
Score:0.70
Offset:6
Orientation:reverse strand
Alignment:TGGSKKGMACCTG--
------NCACCTGTN
 A C G T A C T G A C T G A T C G C A T G A C T G A C T G G T C A C G T A A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

ID4/MA0824.1/Jaspar

Match Rank:2
Score:0.68
Offset:5
Orientation:forward strand
Alignment:TGGSKKGMACCTG--
-----TACACCTGTC
 A C G T A C T G A C T G A T C G C A T G A C T G A C T G G T C A C G T A A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C

TCF4/MA0830.1/Jaspar

Match Rank:3
Score:0.67
Offset:5
Orientation:forward strand
Alignment:TGGSKKGMACCTG--
-----CGCACCTGCT
 A C G T A C T G A C T G A T C G C A T G A C T G A C T G G T C A C G T A A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.67
Offset:5
Orientation:forward strand
Alignment:TGGSKKGMACCTG--
-----NNCACCTGNN
 A C G T A C T G A C T G A T C G C A T G A C T G A C T G G T C A C G T A A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.67
Offset:4
Orientation:forward strand
Alignment:TGGSKKGMACCTG---
----SNGCACCTGCHS
 A C G T A C T G A C T G A T C G C A T G A C T G A C T G G T C A C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGGSKKGMACCTG-----
-NNTNCGCACCTGTNGAN
 A C G T A C T G A C T G A T C G C A T G A C T G A C T G G T C A C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TGGSKKGMACCTG--
-----AACACCTGCT
 A C G T A C T G A C T G A T C G C A T G A C T G A C T G G T C A C G T A A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TGGSKKGMACCTG-
----RYHYACCTGB
 A C G T A C T G A C T G A T C G C A T G A C T G A C T G G T C A C G T A A G T C A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:9
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------TGGSKKGMACCTG-
NVCAKCTGGNNNCCAGMTGB
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T C G C A T G A C T G A C T G G T C A C G T A A G T C A G T C A C G T A C T G A C G T
T A C G T G A C T G A C C G T A A C T G T A G C C G A T A C T G A T C G A G C T A T G C T C G A T A G C G T A C C G T A A C T G T G A C G C A T A C T G A C T G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGGSKKGMACCTG
CWGGCGGGAA----
 A C G T A C G T A C T G A C T G A T C G C A T G A C T G A C T G G T C A C G T A A G T C A G T C A C G T A C T G
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T