Information for 7-KTGAAATTBC (Motif 8)

A C T G C A G T C T A G T C G A G C T A C G T A C A G T C A G T A T G C G A T C
Reverse Opposite:
C T A G T A C G G T C A G T C A G C A T C G A T A G C T G A T C G T C A T G A C
p-value:1e-11
log p-value:-2.690e+01
Information Content per bp:1.482
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif6.80%
Number of Background Sequences with motif1121.9
Percentage of Background Sequences with motif2.36%
Average Position of motif in Targets48.1 +/- 26.7bp
Average Position of motif in Background50.8 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:KTGAAATTBC-
-GGAAATTCCC
 A C T G C A G T C T A G T C G A G C T A C G T A C A G T C A G T A T G C G A T C A C G T
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:KTGAAATTBC-
-GGAAATTCCC
 A C T G C A G T C T A G T C G A G C T A C G T A C A G T C A G T A T G C G A T C A C G T
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--KTGAAATTBC
AGATGCAATCCC
 A C G T A C G T A C T G C A G T C T A G T C G A G C T A C G T A C A G T C A G T A T G C G A T C
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:KTGAAATTBC--
GGGAAATCCCCN
 A C T G C A G T C T A G T C G A G C T A C G T A C A G T C A G T A T G C G A T C A C G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:KTGAAATTBC--
--GGAAANCCCC
 A C T G C A G T C T A G T C G A G C T A C G T A C A G T C A G T A T G C G A T C A C G T A C G T
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-KTGAAATTBC
NCTGGAATGC-
 A C G T A C T G C A G T C T A G T C G A G C T A C G T A C A G T C A G T A T G C G A T C
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:KTGAAATTBC------
-TNGAATTTCATTNAN
 A C T G C A G T C T A G T C G A G C T A C G T A C A G T C A G T A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:KTGAAATTBC-
-GGAAATCCCC
 A C T G C A G T C T A G T C G A G C T A C G T A C A G T C A G T A T G C G A T C A C G T
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

PB0115.1_Ehf_2/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:KTGAAATTBC------
TAGTATTTCCGATCTT
 A C T G C A G T C T A G T C G A G C T A C G T A C A G T C A G T A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G C A G T C T G A A C G T C G A T C G A T G A T C G A T C A C T G G C T A G C A T T A G C C G A T G C A T

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-KTGAAATTBC----
GAAAAAATTGCAAGG
 A C G T A C T G C A G T C T A G T C G A G C T A C G T A C A G T C A G T A T G C G A T C A C G T A C G T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G