Information for 17-TGTGAATGAT (Motif 22)

A C G T A C T G C G A T A C T G C G T A C T G A A C G T A C T G C T G A A C G T
Reverse Opposite:
C G T A A G C T G T A C C G T A A G C T A C G T A G T C C G T A A G T C C G T A
p-value:1e-6
log p-value:-1.469e+01
Information Content per bp:1.885
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif36.4
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets30.6 +/- 15.4bp
Average Position of motif in Background59.5 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1/MA0070.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGTGAATGAT--
TTTGATTGATGN
 A C G T A C T G C G A T A C T G C G T A C T G A A C G T A C T G C T G A A C G T A C G T A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TGTGAATGAT--
--TGATTGATGA
 A C G T A C T G C G A T A C T G C G T A C T G A A C G T A C T G C T G A A C G T A C G T A C G T
A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

JUND/MA0491.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGTGAATGAT-
GGTGACTCATC
 A C G T A C T G C G A T A C T G C G T A C T G A A C G T A C T G C T G A A C G T A C G T
C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C

FOS/MA0476.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGTGAATGAT-
TGTGACTCATT
 A C G T A C T G C G A T A C T G C G T A C T G A A C G T A C T G C T G A A C G T A C G T
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T

Hoxa9/MA0594.1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGTGAATGAT---
--TGATTTATGGC
 A C G T A C T G C G A T A C T G C G T A C T G A A C G T A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

PB0142.1_Jundm2_2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGTGAATGAT----
NNGGTGACTCATCANN
 A C G T A C G T A C G T A C T G C G A T A C T G C G T A C T G A A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T
C A G T G A C T C A T G T C A G A G C T A C T G C G T A A T G C C A G T T G A C C T G A A G C T G A T C T G C A G T C A A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGTGAATGAT----
NNANTGATTGATNTTN
 A C G T A C G T A C G T A C T G C G A T A C T G C G T A C T G A A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGTGAATGAT---
-ATGATKGATGRC
 A C G T A C T G C G A T A C T G C G T A C T G A A C G T A C T G C T G A A C G T A C G T A C G T A C G T
A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGTGAATGAT----
--TGAATTATGCAT
 A C G T A C T G C G A T A C T G C G T A C T G A A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGTGAATGAT----
NNANTGATTGATNNNN
 A C G T A C G T A C G T A C T G C G A T A C T G C G T A C T G A A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C