Information for 12-ATAGCCTTAC (Motif 15)

T C G A G A C T C T G A A T C G A G T C T G A C A G C T A C G T T G C A A T G C
Reverse Opposite:
T A C G A C G T T G C A C T G A A C T G T C A G A T G C G A C T C T G A A G C T
p-value:1e-8
log p-value:-2.069e+01
Information Content per bp:1.693
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.93%
Number of Background Sequences with motif309.0
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets38.7 +/- 27.0bp
Average Position of motif in Background47.5 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ATAGCCTTAC
AAGATATCCTT--
 A C G T A C G T A C G T T C G A G A C T C T G A A T C G A G T C T G A C A G C T A C G T T G C A A T G C
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATAGCCTTAC
BNTGDCCTTG-
 A C G T T C G A G A C T C T G A A T C G A G T C T G A C A G C T A C G T T G C A A T G C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ATAGCCTTAC
-CAGCC----
 T C G A G A C T C T G A A T C G A G T C T G A C A G C T A C G T T G C A A T G C
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ATAGCCTTAC
NNACTTGCCTT--
 A C G T A C G T A C G T T C G A G A C T C T G A A T C G A G T C T G A C A G C T A C G T T G C A A T G C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:5
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------ATAGCCTTAC
ANANNTGATACCCNATN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G A C T C T G A A T C G A G T C T G A C A G C T A C G T T G C A A T G C
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

PH0166.1_Six6_2/Jaspar

Match Rank:6
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------ATAGCCTTAC
AATNTTGATACCCTATN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G A C T C T G A A T C G A G T C T G A C A G C T A C G T T G C A A T G C
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:ATAGCCTTAC-
-TGACCTTGAV
 T C G A G A C T C T G A A T C G A G T C T G A C A G C T A C G T T G C A A T G C A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:ATAGCCTTAC---
--NNACTTACCTN
 T C G A G A C T C T G A A T C G A G T C T G A C A G C T A C G T T G C A A T G C A C G T A C G T A C G T
A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:ATAGCCTTAC-
-TGACCTTGAN
 T C G A G A C T C T G A A T C G A G T C T G A C A G C T A C G T T G C A A T G C A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:ATAGCCTTAC
ATGACCTTGA
 T C G A G A C T C T G A A T C G A G T C T G A C A G C T A C G T T G C A A T G C
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A