Information for 11-GCTCAGTGKKWTS (Motif 13)

A C T G A G T C A C G T A G T C C G T A A C T G A C G T A C T G A C G T A C G T C G A T A G C T A T G C
Reverse Opposite:
A T C G C T G A C G T A G T C A G T C A A G T C C G T A A G T C C G A T A C T G C G T A A C T G A G T C
p-value:1e-9
log p-value:-2.146e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 38.9bp
Average Position of motif in Background45.5 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCTCAGTGKKWTS
-TTRAGTGSYK--
 A C T G A G T C A C G T A G T C C G T A A C T G A C G T A C T G A C G T A C G T C G A T A G C T A T G C
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCTCAGTGKKWTS
-TTAAGTGGT---
 A C T G A G T C A C G T A G T C C G T A A C T G A C G T A C T G A C G T A C G T C G A T A G C T A T G C
A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCTCAGTGKKWTS
-TTAAGTGGN---
 A C T G A G T C A C G T A G T C C G T A A C T G A C G T A C T G A C G T A C G T C G A T A G C T A T G C
A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCTCAGTGKKWTS
DCTCAGCAGG---
 A C T G A G T C A C G T A G T C C G T A A C T G A C G T A C T G A C G T A C G T C G A T A G C T A T G C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCTCAGTGKKWTS
-TTAAGTGCTT--
 A C T G A G T C A C G T A G T C C G T A A C T G A C G T A C T G A C G T A C G T C G A T A G C T A T G C
A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCTCAGTGKKWTS
GCTCCG-------
 A C T G A G T C A C G T A G T C C G T A A C T G A C G T A C T G A C G T A C G T C G A T A G C T A T G C
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCTCAGTGKKWTS
-GTCTGTGGTTT-
 A C T G A G T C A C G T A G T C C G T A A C T G A C G T A C T G A C G T A C G T C G A T A G C T A T G C
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCTCAGTGKKWTS----
NGAGGTCANNGAGTTCANNN
 A C G T A C G T A C G T A C T G A G T C A C G T A G T C C G T A A C T G A C G T A C T G A C G T A C G T C G A T A G C T A T G C A C G T A C G T A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCTCAGTGKKWTS
NGCTN---------
 A C G T A C T G A G T C A C G T A G T C C G T A A C T G A C G T A C T G A C G T A C G T C G A T A G C T A T G C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCTCAGTGKKWTS-
GGGTCAACGAGTTCA
 A C G T A C T G A G T C A C G T A G T C C G T A A C T G A C G T A C T G A C G T A C G T C G A T A G C T A T G C A C G T
C T A G A C T G A C T G A C G T A G T C C T G A G C A T A G T C C T A G C T A G A C T G A C G T C G A T A G T C T C G A