Information for 14-GCCTGTCTGC (Motif 18)

A C T G A G T C A G T C A C G T A C T G A C G T A G T C A C G T C T A G G T A C
Reverse Opposite:
A C T G A G T C C G T A A C T G C G T A G T A C C G T A A C T G A C T G A G T C
p-value:1e-6
log p-value:-1.550e+01
Information Content per bp:1.932
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif48.5
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets52.3 +/- 29.6bp
Average Position of motif in Background54.2 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GCCTGTCTGC
VBSYGTCTGG
 A C T G A G T C A G T C A C G T A C T G A C G T A G T C A C G T C T A G G T A C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.74
Offset:2
Orientation:forward strand
Alignment:GCCTGTCTGC
--CTGTCTGG
 A C T G A G T C A G T C A C G T A C T G A C G T A G T C A C G T C T A G G T A C
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GCCTGTCTGC
GTCATGCHTGRCTGS
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C G T A G T C A C G T C T A G G T A C
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GCCTGTCTGC
--TWGTCTGV
 A C T G A G T C A G T C A C G T A C T G A C G T A G T C A C G T C T A G G T A C
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGTCTGC-----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C G T A G T C A C G T C T A G G T A C A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GCCTGTCTGC---
-SCTGTCARCACC
 A C T G A G T C A G T C A C G T A C T G A C G T A G T C A C G T C T A G G T A C A C G T A C G T A C G T
A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCCTGTCTGC
-GCTGTG---
 A C T G A G T C A G T C A C G T A C T G A C G T A G T C A C G T C T A G G T A C
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGTCTGC----
NNGCGTGTGTGCNGCN
 A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C G T A G T C A C G T C T A G G T A C A C G T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCCTGTCTGC
-GCTGTCAA-
 A C T G A G T C A G T C A C G T A C T G A C G T A G T C A C G T C T A G G T A C
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCTGTCTGC-
TCCTGTTTACA
 A C T G A G T C A G T C A C G T A C T G A C G T A G T C A C G T C T A G G T A C A C G T
C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A