Information for 9-AGCCAATCAG (Motif 7)

T G C A C T A G A G T C A G T C G T C A T C G A G A C T A T G C C T G A C A T G
Reverse Opposite:
G T A C A G C T A T C G C T G A A C G T A C G T A C T G A C T G G A T C A C G T
p-value:1e-14
log p-value:-3.343e+01
Information Content per bp:1.837
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif6.03%
Number of Background Sequences with motif786.8
Percentage of Background Sequences with motif1.64%
Average Position of motif in Targets45.9 +/- 24.1bp
Average Position of motif in Background49.7 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.89
Offset:0
Orientation:forward strand
Alignment:AGCCAATCAG
AGCCAATCGG
 T G C A C T A G A G T C A G T C G T C A T C G A G A C T A T G C C T G A C A T G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.89
Offset:-5
Orientation:forward strand
Alignment:-----AGCCAATCAG
AAATGGACCAATCAG
 A C G T A C G T A C G T A C G T A C G T T G C A C T A G A G T C A G T C G T C A T C G A G A C T A T G C C T G A C A T G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.88
Offset:-3
Orientation:forward strand
Alignment:---AGCCAATCAG
ACTAGCCAATCA-
 A C G T A C G T A C G T T G C A C T A G A G T C A G T C G T C A T C G A G A C T A T G C C T G A C A T G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--AGCCAATCAG------
TGGACCAATCAGCACTCT
 A C G T A C G T T G C A C T A G A G T C A G T C G T C A T C G A G A C T A T G C C T G A C A T G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.79
Offset:2
Orientation:forward strand
Alignment:AGCCAATCAG
--CCAATCAA
 T G C A C T A G A G T C A G T C G T C A T C G A G A C T A T G C C T G A C A T G
A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

PH0026.1_Duxbl/Jaspar

Match Rank:6
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--AGCCAATCAG-----
CGACCCAATCAACGGTG
 A C G T A C G T T G C A C T A G A G T C A G T C G T C A T C G A G A C T A T G C C T G A C A T G A C G T A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AGCCAATCAG
TGCCAA----
 T G C A C T A G A G T C A G T C G T C A T C G A G A C T A T G C C T G A C A T G
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AGCCAATCAG
SCTGTCAVTCAV
 A C G T A C G T T G C A C T A G A G T C A G T C G T C A T C G A G A C T A T G C C T G A C A T G
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:9
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AGCCAATCAG-
NWTAAYCYAATCAWN
 A C G T A C G T A C G T A C G T T G C A C T A G A G T C A G T C G T C A T C G A G A C T A T G C C T G A C A T G A C G T
C A T G G C A T C G A T C G T A C G T A G A T C A G T C A G C T C G T A C G T A A C G T A G T C C G T A C G T A G C A T

DUX4/MA0468.1/Jaspar

Match Rank:10
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGCCAATCAG
TAATTTAATCA-
 A C G T A C G T T G C A C T A G A G T C A G T C G T C A T C G A G A C T A T G C C T G A C A T G
G C A T C T G A C G T A G A C T A G C T A G C T G T C A C G T A A C G T A G T C C G T A A C G T