Information for 14-GGGAAATTCC (Motif 15)

C T A G C T A G T A C G T C G A G T C A C G T A A G C T A G C T A T G C T G A C
Reverse Opposite:
A C T G T A C G T C G A T C G A G C A T C A G T A G C T A T G C G A T C G A T C
p-value:1e-8
log p-value:-1.868e+01
Information Content per bp:1.658
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif4.52%
Number of Background Sequences with motif751.4
Percentage of Background Sequences with motif1.56%
Average Position of motif in Targets55.4 +/- 24.5bp
Average Position of motif in Background50.6 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.91
Offset:1
Orientation:forward strand
Alignment:GGGAAATTCC-
-GGAAATTCCC
 C T A G C T A G T A C G T C G A G T C A C G T A A G C T A G C T A T G C T G A C A C G T
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:GGGAAATTCC-
-GGAAATTCCC
 C T A G C T A G T A C G T C G A G T C A C G T A A G C T A G C T A T G C T G A C A C G T
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:GGGAAATTCC--
GGGAAATCCCCN
 C T A G C T A G T A C G T C G A G T C A C G T A A G C T A G C T A T G C T G A C A C G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:GGGAAATTCC-
-GGAAANCCCC
 C T A G C T A G T A C G T C G A G T C A C G T A A G C T A G C T A T G C T G A C A C G T
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:GGGAAATTCC-
-GGAAATCCCC
 C T A G C T A G T A C G T C G A G T C A C G T A A G C T A G C T A T G C T G A C A C G T
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GGGAAATTCC--
AGGGGAATCCCCT
 A C G T C T A G C T A G T A C G T C G A G T C A C G T A A G C T A G C T A T G C T G A C A C G T A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:7
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGGAAATTCC-
GGGGGAATCCCC
 A C G T C T A G C T A G T A C G T C G A G T C A C G T A A G C T A G C T A T G C T G A C A C G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFATC1/MA0624.1/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGGAAATTCC
NNTGGAAANN--
 A C G T A C G T C T A G C T A G T A C G T C G A G T C A C G T A A G C T A G C T A T G C T G A C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GGGAAATTCC---
---GCATTCCAGN
 C T A G C T A G T A C G T C G A G T C A C G T A A G C T A G C T A T G C T G A C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GGGAAATTCC
NACAGGAAAT---
 A C G T A C G T A C G T C T A G C T A G T A C G T C G A G T C A C G T A A G C T A G C T A T G C T G A C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T