Information for 12-GACCATGAGAAGT (Motif 12)

A C T G C T G A A G T C A G T C C G T A C G A T A C T G C T G A A T C G C G T A C G T A A C T G A G C T
Reverse Opposite:
C T G A A G T C A C G T A C G T A T G C A G C T A G T C C G T A A C G T A C T G A C T G A G C T A G T C
p-value:1e-8
log p-value:-1.946e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.8 +/- 25.3bp
Average Position of motif in Background28.6 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GACCATGAGAAGT
TGACCTTGAN----
 A C G T A C T G C T G A A G T C A G T C C G T A C G A T A C T G C T G A A T C G C G T A C G T A A C T G A G C T
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GACCATGAGAAGT
NATGACCTTGA-----
 A C G T A C G T A C G T A C T G C T G A A G T C A G T C C G T A C G A T A C T G C T G A A T C G C G T A C G T A A C T G A G C T
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GACCATGAGAAGT
TGACCTTGAV----
 A C G T A C T G C T G A A G T C A G T C C G T A C G A T A C T G C T G A A T C G C G T A C G T A A C T G A G C T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GACCATGAGAAGT
---CSTGGGAAAD
 A C T G C T G A A G T C A G T C C G T A C G A T A C T G C T G A A T C G C G T A C G T A A C T G A G C T
A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

Esrra/MA0592.2/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GACCATGAGAAGT
ATGACCTTGAA----
 A C G T A C G T A C T G C T G A A G T C A G T C C G T A C G A T A C T G C T G A A T C G C G T A C G T A A C T G A G C T
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GACCATGAGAAGT
-------NGAAGC
 A C T G C T G A A G T C A G T C C G T A C G A T A C T G C T G A A T C G C G T A C G T A A C T G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GACCATGAGAAGT---
-ACCGTGACTAATTNN
 A C T G C T G A A G T C A G T C C G T A C G A T A C T G C T G A A T C G C G T A C G T A A C T G A G C T A C G T A C G T A C G T
A C G T C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GACCATGAGAAGT
ATGACCTTGA-----
 A C G T A C G T A C T G C T G A A G T C A G T C C G T A C G A T A C T G C T G A A T C G C G T A C G T A A C T G A G C T
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GACCATGAGAAGT
NTGACCTTGA-----
 A C G T A C G T A C T G C T G A A G T C A G T C C G T A C G A T A C T G C T G A A T C G C G T A C G T A A C T G A G C T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------GACCATGAGAAGT
NNNNATGACCTTGANTN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A A G T C A G T C C G T A C G A T A C T G C T G A A T C G C G T A C G T A A C T G A G C T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T A C G T