Information for 7-CBAGGAATTTCCT (Motif 9)

T A G C A C G T C T G A A C T G A C T G C G T A C G T A C G A T A C G T A G C T A G T C A G T C A C G T
Reverse Opposite:
C G T A C T A G C T A G C T G A C G T A C G T A A C G T A C G T A G T C A G T C A G C T T C G A A C T G
p-value:1e-11
log p-value:-2.696e+01
Information Content per bp:1.840
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.3 +/- 15.8bp
Average Position of motif in Background67.5 +/- 4.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:CBAGGAATTTCCT
--GGGAATTTCC-
 T A G C A C G T C T G A A C T G A C T G C G T A C G T A C G A T A C G T A G C T A G T C A G T C A C G T
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.79
Offset:2
Orientation:forward strand
Alignment:CBAGGAATTTCCT
--GGGAATTTCC-
 T A G C A C G T C T G A A C T G A C T G C G T A C G T A C G A T A C G T A G C T A G T C A G T C A C G T
A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CBAGGAATTTCCT
NCTGGAATGC---
 T A G C A C G T C T G A A C T G A C T G C G T A C G T A C G A T A C G T A G C T A G T C A G T C A C G T
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.71
Offset:2
Orientation:forward strand
Alignment:CBAGGAATTTCCT
--GGGGATTTCC-
 T A G C A C G T C T G A A C T G A C T G C G T A C G T A C G A T A C G T A G C T A G T C A G T C A C G T
A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.71
Offset:2
Orientation:forward strand
Alignment:CBAGGAATTTCCT
--GGGGATTTCC-
 T A G C A C G T C T G A A C T G A C T G C G T A C G T A C G A T A C G T A G C T A G T C A G T C A C G T
A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.70
Offset:6
Orientation:forward strand
Alignment:CBAGGAATTTCCT---
------ATTTCCTGTN
 T A G C A C G T C T G A A C T G A C T G C G T A C G T A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CBAGGAATTTCCT
-NGGGGATTTCCC
 T A G C A C G T C T G A A C T G A C T G C G T A C G T A C G A T A C G T A G C T A G T C A G T C A C G T
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:8
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CBAGGAATTTCCT
CCWGGAATGY---
 T A G C A C G T C T G A A C T G A C T G C G T A C G T A C G A T A C G T A G C T A G T C A G T C A C G T
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CBAGGAATTTCCT
CCWGGAATGY---
 T A G C A C G T C T G A A C T G A C T G C G T A C G T A C G A T A C G T A G C T A G T C A G T C A C G T
A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CBAGGAATTTCCT
-NTGGAATGTN--
 T A G C A C G T C T G A A C T G A C T G C G T A C G T A C G A T A C G T A G C T A G T C A G T C A C G T
A C G T C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T