Information for 24-TGCAGGTCCAATG (Motif 43)

A C G T A C T G A G T C C G T A A C T G A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C G T A C T G A C T G C G T A A G T C A G T C A C G T A C T G A G T C C G T A
p-value:1e-6
log p-value:-1.428e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.3 +/- 35.2bp
Average Position of motif in Background64.5 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGGTCCAATG
SDGCAGGTGCNS--
 A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C T G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGCAGGTCCAATG
CATGCGGGTAC----
 A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C T G
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGCAGGTCCAATG
AACAGGTGT----
 A C G T A C T G A G T C C G T A A C T G A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C T G
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TGCAGGTCCAATG--
-----AGCCAATCGG
 A C G T A C T G A G T C C G T A A C T G A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGCAGGTCCAATG
TKCTGTTCCA---
 A C G T A C T G A G T C C G T A A C T G A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C T G
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGCAGGTCCAATG
NNCAGGTGCG---
 A C G T A C T G A G T C C G T A A C T G A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C T G
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGCAGGTCCAATG
GACAGGTGTN---
 A C G T A C T G A G T C C G T A A C T G A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C T G
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGCAGGTCCAATG-
ATCCACAGGTGCGAAAA
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGCAGGTCCAATG-
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGCAGGTCCAATG
NNCAGGTGNN---
 A C G T A C T G A G T C C G T A A C T G A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C T G
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T