Information for 17-RGMSTGTKTTGGA (Motif 22)

C T G A A C T G T G A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C T G C T A G C G T A
Reverse Opposite:
A C G T A G T C A G T C G T C A C G T A G T C A C G T A A G T C C G T A A T C G A C T G A G T C A G C T
p-value:1e-10
log p-value:-2.499e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.3 +/- 28.1bp
Average Position of motif in Background53.0 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-RGMSTGTKTTGGA---
NNCTTTGTTTTGNTNNN
 A C G T C T G A A C T G T G A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C T G C T A G C G T A A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--RGMSTGTKTTGGA
GGGGCTYGKCTGGGA
 A C G T A C G T C T G A A C T G T G A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C T G C T A G C G T A
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

PB0141.1_Isgf3g_2/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--RGMSTGTKTTGGA
NNGTANTGTTTTNC-
 A C G T A C G T C T G A A C T G T G A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C T G C T A G C G T A
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C A C G T

RREB1/MA0073.1/Jaspar

Match Rank:4
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------RGMSTGTKTTGGA-
NGGGGGGGGGTGGTTTGGGG
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G T G A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C T G C T A G C G T A A C G T
A C G T A T C G C A T G A C T G C A T G A C T G A C T G A C T G A C T G A C T G A C G T A C T G C A T G A C G T A C G T A C G T A C T G A C T G A C T G A C T G

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.53
Offset:8
Orientation:forward strand
Alignment:RGMSTGTKTTGGA-
--------TTGGCA
 C T G A A C T G T G A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C T G C T A G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.52
Offset:4
Orientation:forward strand
Alignment:RGMSTGTKTTGGA-
----NATGTTGCAA
 C T G A A C T G T G A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C T G C T A G C G T A A C G T
A C G T A C G T A C G T A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A

PB0123.1_Foxl1_2/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-RGMSTGTKTTGGA--
NNTTTTGTTTTGATNT
 A C G T C T G A A C T G T G A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C T G C T A G C G T A A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:RGMSTGTKTTGGA----
--ANATTTTTGCAANTN
 C T G A A C T G T G A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C T G C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-RGMSTGTKTTGGA-
TAGAANVTTCTAGAA
 A C G T C T G A A C T G T G A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C T G C T A G C G T A A C G T
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--RGMSTGTKTTGGA-
NNTGTTTATTTTGGCA
 A C G T A C G T C T G A A C T G T G A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C T G C T A G C G T A A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A