Information for 14-TTGCATTAGADTGATT (Motif 20)

A G C T A C G T A T C G G T A C G T C A A C G T A C G T C G T A A C T G C G T A C G A T A C G T A C T G C G T A A C G T A C G T
Reverse Opposite:
C G T A T C G A G A C T G T A C G T C A G C A T A C G T T A G C C G A T G T C A C G T A C A G T A C T G A T G C C G T A C T G A
p-value:1e-11
log p-value:-2.560e+01
Information Content per bp:1.721
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.2 +/- 29.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TTGCATTAGADTGATT
ATTTGCATAACAAAG---
 A C G T A C G T A G C T A C G T A T C G G T A C G T C A A C G T A C G T C G T A A C T G C G T A C G A T A C G T A C T G C G T A A C G T A C G T
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G A C G T A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TTGCATTAGADTGATT
ATTTGCATAACAATG---
 A C G T A C G T A G C T A C G T A T C G G T A C G T C A A C G T A C G T C G T A A C T G C G T A C G A T A C G T A C T G C G T A A C G T A C G T
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTGCATTAGADTGATT
ATTGCATCAK-------
 A C G T A G C T A C G T A T C G G T A C G T C A A C G T A C G T C G T A A C T G C G T A C G A T A C G T A C T G C G T A A C G T A C G T
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTGCATTAGADTGATT
ATTGCATCAT-------
 A C G T A G C T A C G T A T C G G T A C G T C A A C G T A C G T C G T A A C T G C G T A C G A T A C G T A C T G C G T A A C G T A C G T
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTGCATTAGADTGATT
ATTTGCATAA--------
 A C G T A C G T A G C T A C G T A T C G G T A C G T C A A C G T A C G T C G T A A C T G C G T A C G A T A C G T A C T G C G T A A C G T A C G T
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTGCATTAGADTGATT
TTGCAACATN------
 A G C T A C G T A T C G G T A C G T C A A C G T A C G T C G T A A C T G C G T A C G A T A C G T A C T G C G T A A C G T A C G T
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTGCATTAGADTGATT
VTTRCATAAY-------
 A C G T A G C T A C G T A T C G G T A C G T C A A C G T A C G T C G T A A C T G C G T A C G A T A C G T A C T G C G T A A C G T A C G T
T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTGCATTAGADTGATT
ATTGCATAA--------
 A C G T A G C T A C G T A T C G G T A C G T C A A C G T A C G T C G T A A C T G C G T A C G A T A C G T A C T G C G T A A C G T A C G T
T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTGCATTAGADTGATT
ATTGCACAATA------
 A C G T A G C T A C G T A T C G G T A C G T C A A C G T A C G T C G T A A C T G C G T A C G A T A C G T A C T G C G T A A C G T A C G T
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T A C G T A C G T A C G T A C G T A C G T

ATF4/MA0833.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTGCATTAGADTGATT
TATTGCATCATCC-----
 A C G T A C G T A G C T A C G T A T C G G T A C G T C A A C G T A C G T C G T A A C T G C G T A C G A T A C G T A C T G C G T A A C G T A C G T
A C G T T C G A C G A T C A G T C T A G G T A C T C G A C G A T G A T C G T C A A C G T G T A C G A T C A C G T A C G T A C G T A C G T A C G T