Information for 11-AACCATGTGACCT (Motif 10)

G C T A C T G A G T A C A G T C C G T A G C A T A T C G A C G T A T C G C G T A A G T C A G T C A G C T
Reverse Opposite:
C T G A A C T G A C T G A C G T A T G C C G T A A T G C C G T A A C G T A C T G A C T G G A C T C G A T
p-value:1e-11
log p-value:-2.741e+01
Information Content per bp:1.821
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.2 +/- 6.5bp
Average Position of motif in Background64.7 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1/MA0093.2/Jaspar

Match Rank:1
Score:0.82
Offset:1
Orientation:forward strand
Alignment:AACCATGTGACCT
-GCCACGTGACC-
 G C T A C T G A G T A C A G T C C G T A G C A T A T C G A C G T A T C G C G T A A G T C A G T C A G C T
A C G T T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T

USF2/MA0526.1/Jaspar

Match Rank:2
Score:0.81
Offset:1
Orientation:forward strand
Alignment:AACCATGTGACCT
-GTCATGTGACC-
 G C T A C T G A G T A C A G T C C G T A G C A T A T C G A C G T A T C G C G T A A G T C A G T C A G C T
A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.74
Offset:1
Orientation:forward strand
Alignment:AACCATGTGACCT
-RTCATGTGAC--
 G C T A C T G A G T A C A G T C C G T A G C A T A T C G A C G T A T C G C G T A A G T C A G T C A G C T
A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:4
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:AACCATGTGACCT---
---CNNTTGACCTTTG
 G C T A C T G A G T A C A G T C C G T A G C A T A T C G A C G T A T C G C G T A A G T C A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AACCATGTGACCT
-ACCACGTGAC--
 G C T A C T G A G T A C A G T C C G T A G C A T A T C G A C G T A T C G C G T A A G T C A G T C A G C T
A C G T T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AACCATGTGACCT
-KCCACGTGAC--
 G C T A C T G A G T A C A G T C C G T A G C A T A T C G A C G T A T C G C G T A A G T C A G T C A G C T
A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.71
Offset:6
Orientation:reverse strand
Alignment:AACCATGTGACCT-
------GTGACCTT
 G C T A C T G A G T A C A G T C C G T A G C A T A T C G A C G T A T C G C G T A A G T C A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.71
Offset:7
Orientation:reverse strand
Alignment:AACCATGTGACCT
-------TGACCT
 G C T A C T G A G T A C A G T C C G T A G C A T A T C G A C G T A T C G C G T A A G T C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.70
Offset:7
Orientation:reverse strand
Alignment:AACCATGTGACCT--
-------TGACCTYA
 G C T A C T G A G T A C A G T C C G T A G C A T A T C G A C G T A T C G C G T A A G T C A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

E-box(bHLH)/Promoter/Homer

Match Rank:10
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AACCATGTGACCT-
--TCACGTGACCGG
 G C T A C T G A G T A C A G T C C G T A G C A T A T C G A C G T A T C G C G T A A G T C A G T C A G C T A C G T
A C G T A C G T A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G