Information for 2-AYRGYGCCMCCTRSTG (Motif 2)

C T G A A G T C C T A G A T C G A G T C C T A G T G A C A G T C G T A C A G T C A G T C A G C T C T G A A T C G C A G T A T C G
Reverse Opposite:
A T G C G C T A T A G C G A C T C T G A A C T G C T A G A C T G A C T G A C T G G A T C C T A G A T G C G A T C T C A G G A C T
p-value:1e-33
log p-value:-7.786e+01
Information Content per bp:1.614
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif7.26%
Number of Background Sequences with motif453.3
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets46.7 +/- 22.8bp
Average Position of motif in Background49.2 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:forward strand
Alignment:AYRGYGCCMCCTRSTG----
ANAGTGCCACCTGGTGGCCA
 C T G A A G T C C T A G A T C G A G T C C T A G T G A C A G T C G T A C A G T C A G T C A G C T C T G A A T C G C A G T A T C G A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:AYRGYGCCMCCTRSTG----
-TAGCGCCCCCTGGTGGCCA
 C T G A A G T C C T A G A T C G A G T C C T A G T G A C A G T C G T A C A G T C A G T C A G C T C T G A A T C G C A G T A T C G A C G T A C G T A C G T A C G T
A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--AYRGYGCCMCCTRSTG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T C T G A A G T C C T A G A T C G A G T C C T A G T G A C A G T C G T A C A G T C A G T C A G C T C T G A A T C G C A G T A T C G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AYRGYGCCMCCTRSTG
GGTCCCGCCCCCTTCTC
 A C G T C T G A A G T C C T A G A T C G A G T C C T A G T G A C A G T C G T A C A G T C A G T C A G C T C T G A A T C G C A G T A T C G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

ZIC4/MA0751.1/Jaspar

Match Rank:5
Score:0.64
Offset:4
Orientation:forward strand
Alignment:AYRGYGCCMCCTRSTG---
----GACCCCCCGCTGTGC
 C T G A A G T C C T A G A T C G A G T C C T A G T G A C A G T C G T A C A G T C A G T C A G C T C T G A A T C G C A G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.63
Offset:4
Orientation:forward strand
Alignment:AYRGYGCCMCCTRSTG---
----GGCCYCCTGCTGDGH
 C T G A A G T C C T A G A T C G A G T C C T A G T G A C A G T C G T A C A G T C A G T C A G C T C T G A A T C G C A G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.62
Offset:5
Orientation:forward strand
Alignment:AYRGYGCCMCCTRSTG
-----GCCATCTGTT-
 C T G A A G T C C T A G A T C G A G T C C T A G T G A C A G T C G T A C A G T C A G T C A G C T C T G A A T C G C A G T A T C G
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AYRGYGCCMCCTRSTG--
----GACCCCCCGCTGTG
 C T G A A G T C C T A G A T C G A G T C C T A G T G A C A G T C G T A C A G T C A G T C A G C T C T G A A T C G C A G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

ZIC3/MA0697.1/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AYRGYGCCMCCTRSTG---
----GACCCCCCGCTGCGC
 C T G A A G T C C T A G A T C G A G T C C T A G T G A C A G T C G T A C A G T C A G T C A G C T C T G A A T C G C A G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AYRGYGCCMCCTRSTG
---ATGCCAACC----
 C T G A A G T C C T A G A T C G A G T C C T A G T G A C A G T C G T A C A G T C A G T C A G C T C T G A A T C G C A G T A T C G
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T