Information for 11-GARTTTKKRATCA (Motif 15)

A C T G C G T A C T A G A C G T A C G T A C G T A C T G C A G T C T G A C G T A A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C G T G A C T G T C A G T A C C G T A C G T A G T C A A G T C A C G T A G T C
p-value:1e-8
log p-value:-1.919e+01
Information Content per bp:1.871
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.2 +/- 29.1bp
Average Position of motif in Background43.1 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GARTTTKKRATCA-----
-AAGGCGAAATCATCGCA
 A C T G C G T A C T A G A C G T A C G T A C G T A C T G C A G T C T G A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GARTTTKKRATCA--
NAGATWNBNATCTNN
 A C T G C G T A C T A G A C G T A C G T A C G T A C T G C A G T C T G A C G T A A C G T A G T C C G T A A C G T A C G T
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GARTTTKKRATCA
---ATTTGAATT-
 A C T G C G T A C T A G A C G T A C G T A C G T A C T G C A G T C T G A C G T A A C G T A G T C C G T A
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GARTTTKKRATCA-----
-NNNTTTTAATTAANNNN
 A C T G C G T A C T A G A C G T A C G T A C G T A C T G C A G T C T G A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

PB0187.1_Tcf7_2/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GARTTTKKRATCA--
NNNTTTNTAATACNG
 A C T G C G T A C T A G A C G T A C G T A C G T A C T G C A G T C T G A C G T A A C G T A G T C C G T A A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GARTTTKKRATCA-
----ATTGCATCAT
 A C T G C G T A C T A G A C G T A C G T A C G T A C T G C A G T C T G A C G T A A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GARTTTKKRATCA-
------CCAATCAA
 A C T G C G T A C T A G A C G T A C G T A C G T A C T G C A G T C T G A C G T A A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GARTTTKKRATCA-
----ATTGCATCAK
 A C T G C G T A C T A G A C G T A C G T A C G T A C T G C A G T C T G A C G T A A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

PH0100.1_Lmx1a/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GARTTTKKRATCA-----
-NNTTTTTAATTAATTCG
 A C T G C G T A C T A G A C G T A C G T A C G T A C T G C A G T C T G A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C T A G C G A T C G A T G C A T G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G A T C G A T A T G C A T C G

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GARTTTKKRATCA
TGAATTATGCAT--
 A C G T A C T G C G T A C T A G A C G T A C G T A C G T A C T G C A G T C T G A C G T A A C G T A G T C C G T A
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T A C G T