Information for 14-GGGTCGCAAA (Motif 15)

A C T G A C T G A T C G A C G T A G T C A C T G A G T C C G T A C T G A C T G A
Reverse Opposite:
A G C T A G C T A C G T A C T G A G T C T C A G G T C A A T G C T A G C A G T C
p-value:1e-9
log p-value:-2.102e+01
Information Content per bp:1.855
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif42.4
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets47.0 +/- 24.6bp
Average Position of motif in Background47.9 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0067.1_Hoxc12/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GGGTCGCAAA-----
TTAGGTCGTAAAATTTC
 A C G T A C G T A C T G A C T G A T C G A C G T A G T C A C T G A G T C C G T A C T G A C T G A A C G T A C G T A C G T A C G T A C G T
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

HOXC12/MA0906.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGGTCGCAAA--
-GGTCGTAAAAA
 A C T G A C T G A T C G A C G T A G T C A C T G A G T C C G T A C T G A C T G A A C G T A C G T
A C G T C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

PH0077.1_Hoxd12/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGGTCGCAAA-----
CAAGGTCGTAAAATCTT
 A C G T A C G T A C T G A C T G A T C G A C G T A G T C A C T G A G T C C G T A C T G A C T G A A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

HOXC11/MA0651.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGGTCGCAAA--
-GGTCGTAAAAT
 A C T G A C T G A T C G A C G T A G T C A C T G A G T C C G T A C T G A C T G A A C G T A C G T
A C G T C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

PH0076.1_Hoxd11/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGGTCGCAAA-----
TAAGGTCGTAAAATCCT
 A C G T A C G T A C T G A C T G A T C G A C G T A G T C A C T G A G T C C G T A C T G A C T G A A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGGTCGCAAA
NATGTTGCAA-
 A C G T A C T G A C T G A T C G A C G T A G T C A C T G A G T C C G T A C T G A C T G A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGGTCGCAAA--
-AGTCGTAAAAA
 A C T G A C T G A T C G A C G T A G T C A C T G A G T C C G T A C T G A C T G A A C G T A C G T
A C G T T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A

PH0065.1_Hoxc10/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGGTCGCAAA----
TAAAGTCGTAAAACGT
 A C G T A C G T A C T G A C T G A T C G A C G T A G T C A C T G A G T C C G T A C T G A C T G A A C G T A C G T A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GGGTCGCAAA---
-GGTCGTAAAATT
 A C T G A C T G A T C G A C G T A G T C A C T G A G T C C G T A C T G A C T G A A C G T A C G T A C G T
A C G T C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

HOXD11/MA0908.1/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGGTCGCAAA--
--GTCGTAAAAA
 A C T G A C T G A T C G A C G T A G T C A C T G A G T C C G T A C T G A C T G A A C G T A C G T
A C G T A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A