Information for 3-GTTRCATCASMAR (Motif 3)

A C T G A G C T A C G T C T G A A G T C C G T A A C G T A G T C C G T A A T C G G T C A C G T A C T G A
Reverse Opposite:
A G C T A C G T A C G T T A G C A C G T C T A G C G T A A C G T A C T G A G C T C G T A C T G A A G T C
p-value:1e-21
log p-value:-4.861e+01
Information Content per bp:1.875
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.3 +/- 33.1bp
Average Position of motif in Background65.2 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GTTRCATCASMAR
ATTGCATCAK---
 A C T G A G C T A C G T C T G A A G T C C G T A A C G T A G T C C G T A A T C G G T C A C G T A C T G A
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GTTRCATCASMAR
ATTGCATCAT---
 A C T G A G C T A C G T C T G A A G T C C G T A A C G T A G T C C G T A A T C G G T C A C G T A C T G A
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GTTRCATCASMAR
-TTGCAACATN--
 A C T G A G C T A C G T C T G A A G T C C G T A A C G T A G T C C G T A A T C G G T C A C G T A C T G A
A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T

ATF4/MA0833.1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GTTRCATCASMAR
TATTGCATCATCC-
 A C G T A C T G A G C T A C G T C T G A A G T C C G T A A C G T A G T C C G T A A T C G G T C A C G T A C T G A
A C G T T C G A C G A T C A G T C T A G G T A C T C G A C G A T G A T C G T C A A C G T G T A C G A T C A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTTRCATCASMAR
VTTRCATAAY---
 A C T G A G C T A C G T C T G A A G T C C G T A A C G T A G T C C G T A A T C G G T C A C G T A C T G A
T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T A C G T A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTTRCATCASMAR
ANGTTACATAA----
 A C G T A C G T A C T G A G C T A C G T C T G A A G T C C G T A A C G T A G T C C G T A A T C G G T C A C G T A C T G A
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T A C G T A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTTRCATCASMAR
ATTGCATAA----
 A C T G A G C T A C G T C T G A A G T C C G T A A C G T A G T C C G T A A T C G G T C A C G T A C T G A
T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A A C G T A C G T A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTTRCATCASMAR-
ATTTGCATAACAAAG
 A C G T A C T G A G C T A C G T C T G A A G T C C G T A A C G T A G T C C G T A A T C G G T C A C G T A C T G A A C G T
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

JUN/MA0488.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTTRCATCASMAR
ATGACATCATCNN
 A C T G A G C T A C G T C T G A A G T C C G T A A C G T A G T C C G T A A T C G G T C A C G T A C T G A
T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

HLF/MA0043.2/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTTRCATCASMAR
CATTACGTAACC--
 A C G T A C T G A G C T A C G T C T G A A G T C C G T A A C G T A G T C C G T A A T C G G T C A C G T A C T G A
G A T C T C G A G C A T A C G T C T G A A G T C T C A G G A C T G T C A C G T A A G T C G T A C A C G T A C G T