Information for 13-GGGATTCCGT (Motif 19)

A C T G A C T G A C T G C G T A A C G T A G C T A G T C G A T C A T C G C G A T
Reverse Opposite:
G C T A A T G C C T A G A C T G C T G A C G T A C G A T A G T C G T A C A G T C
p-value:1e-9
log p-value:-2.137e+01
Information Content per bp:1.858
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif30.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets32.5 +/- 26.5bp
Average Position of motif in Background49.4 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGGATTCCGT
GGGGATTTCC--
 A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G C T A G T C G A T C A T C G C G A T
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGGATTCCGT-
GGGGATTCCCCC
 A C G T A C T G A C T G A C T G C G T A A C G T A G C T A G T C G A T C A T C G C G A T A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGGATTCCGT-
-RCATTCCWGG
 A C T G A C T G A C T G C G T A A C G T A G C T A G T C G A T C A T C G C G A T A C G T
A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

NFKB1/MA0105.4/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGGATTCCGT-
AGGGGATTCCCCT
 A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G C T A G T C G A T C A T C G C G A T A C G T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGGATTCCGT
NGGGATTA---
 A C G T A C T G A C T G A C T G C G T A A C G T A G C T A G T C G A T C A T C G C G A T
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGGATTCCGT
GGGGATTTCC--
 A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G C T A G T C G A T C A T C G C G A T
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGGATTCCGT-
-NRYTTCCGGY
 A C T G A C T G A C T G C G T A A C G T A G C T A G T C G A T C A T C G C G A T A C G T
A C G T G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T

NFKB2/MA0778.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGGATTCCGT-
AGGGGATTCCCCT
 A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G C T A G T C G A T C A T C G C G A T A C G T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

PH0124.1_Obox5_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GGGATTCCGT---
TAGAGGGATTAAATTTC
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G C T A G T C G A T C A T C G C G A T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGGATTCCGT
GGGATTANN-
 A C T G A C T G A C T G C G T A A C G T A G C T A G T C G A T C A T C G C G A T
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T