Information for 3-SCGRGATSAGGMWGGW (Motif 14)

A T C G A G T C A C T G C T A G A C T G C T G A A C G T A T G C G T C A A C T G A C T G G T C A C G A T A C T G A C T G C G T A
Reverse Opposite:
C G A T A G T C A G T C C G T A C A G T A G T C A G T C A C G T T A C G G T C A A G C T A G T C G A T C A G T C A C T G A T G C
p-value:1e-11
log p-value:-2.589e+01
Information Content per bp:1.840
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 18.1bp
Average Position of motif in Background70.7 +/- 6.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:1
Score:0.57
Offset:2
Orientation:forward strand
Alignment:SCGRGATSAGGMWGGW
--CAGATAAGGN----
 A T C G A G T C A C T G C T A G A C T G C T G A A C G T A T G C G T C A A C T G A C T G G T C A C G A T A C T G A C T G C G T A
A C G T A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T A C G T A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:SCGRGATSAGGMWGGW
--NAGATAAGNN----
 A T C G A G T C A C T G C T A G A C T G C T G A A C G T A T G C G T C A A C T G A C T G G T C A C G A T A C T G A C T G C G T A
A C G T A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T A C G T A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---SCGRGATSAGGMWGGW
TTGCCCGGATTAGG-----
 A C G T A C G T A C G T A T C G A G T C A C T G C T A G A C T G C T G A A C G T A T G C G T C A A C T G A C T G G T C A C G A T A C T G A C T G C G T A
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G A C G T A C G T A C G T A C G T A C G T

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:SCGRGATSAGGMWGGW
-NBWGATAAGR-----
 A T C G A G T C A C T G C T A G A C T G C T G A A C G T A T G C G T C A A C T G A C T G G T C A C G A T A C T G A C T G C G T A
A C G T T A C G A T G C G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:SCGRGATSAGGMWGGW
-NVAGATAAGR-----
 A T C G A G T C A C T G C T A G A C T G C T G A A C G T A T G C G T C A A C T G A C T G G T C A C G A T A C T G A C T G C G T A
A C G T T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:SCGRGATSAGGMWGGW
--NGGATTAN------
 A T C G A G T C A C T G C T A G A C T G C T G A A C G T A T G C G T C A A C T G A C T G G T C A C G A T A C T G A C T G C G T A
A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:SCGRGATSAGGMWGGW
-----ANCAGGAAGT-
 A T C G A G T C A C T G C T A G A C T G C T G A A C G T A T G C G T C A A C T G A C T G G T C A C G A T A C T G A C T G C G T A
A C G T A C G T A C G T A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:SCGRGATSAGGMWGGW
NNGAGATAAGA-----
 A T C G A G T C A C T G C T A G A C T G C T G A A C G T A T G C G T C A A C T G A C T G G T C A C G A T A C T G A C T G C G T A
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:SCGRGATSAGGMWGGW
--GGGATTANN-----
 A T C G A G T C A C T G C T A G A C T G C T G A A C G T A T G C G T C A A C T G A C T G G T C A C G A T A C T G A C T G C G T A
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:SCGRGATSAGGMWGGW
---GGATTAGC-----
 A T C G A G T C A C T G C T A G A C T G C T G A A C G T A T G C G T C A A C T G A C T G G T C A C G A T A C T G A C T G C G T A
A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T A C G T