Information for 15-CCCMCTGGTG (Motif 21)

T G A C A G T C A G T C G T A C A G T C A C G T A C T G A C T G A C G T A T C G
Reverse Opposite:
A T G C G T C A A G T C G T A C C G T A C T A G A C T G C T A G T C A G A C T G
p-value:1e-7
log p-value:-1.706e+01
Information Content per bp:1.764
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif35.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets49.4 +/- 28.0bp
Average Position of motif in Background42.1 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.73
Offset:-8
Orientation:forward strand
Alignment:--------CCCMCTGGTG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G T C A G T C G T A C A G T C A C G T A C T G A C T G A C G T A T C G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----CCCMCTGGTG----
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T T G A C A G T C A G T C G T A C A G T C A C G T A C T G A C T G A C G T A T C G A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------CCCMCTGGTG----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G T C A G T C G T A C A G T C A C G T A C T G A C T G A C G T A T C G A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCCMCTGGTG--
CCCCCTGCTGTG
 T G A C A G T C A G T C G T A C A G T C A C G T A C T G A C T G A C G T A T C G A C G T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0102.1_Zic2_1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCCMCTGGTG---
CCCCCCCGGGGGGGT
 A C G T A C G T T G A C A G T C A G T C G T A C A G T C A C G T A C T G A C T G A C G T A T C G A C G T A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCCMCTGGTG----
NNNCCATTGTGTNAN
 A C G T T G A C A G T C A G T C G T A C A G T C A C G T A C T G A C T G A C G T A T C G A C G T A C G T A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCCMCTGGTG--
TCCCCTGGGGAC
 T G A C A G T C A G T C G T A C A G T C A C G T A C T G A C T G A C G T A T C G A C G T A C G T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

PB0103.1_Zic3_1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCMCTGGTG---
CCCCCCCGGGGGGGT
 A C G T A C G T T G A C A G T C A G T C G T A C A G T C A C G T A C T G A C T G A C G T A T C G A C G T A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCCMCTGGTG
--CCTTTGTT
 T G A C A G T C A G T C G T A C A G T C A C G T A C T G A C T G A C G T A T C G
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCMCTGGTG---
GGCCYCCTGCTGDGH
 A C G T A C G T T G A C A G T C A G T C G T A C A G T C A C G T A C T G A C T G A C G T A T C G A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C