Information for 6-GGAAAGGTCG (Motif 9)

A C T G A C T G C G T A C G T A C G T A C T A G A C T G C A G T G T A C A C T G
Reverse Opposite:
G T A C C A T G G T C A A G T C A G T C G C A T A C G T A C G T A G T C A G T C
p-value:1e-9
log p-value:-2.233e+01
Information Content per bp:1.847
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif136.3
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets39.9 +/- 24.5bp
Average Position of motif in Background47.6 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GGAAAGGTCG
ANGNAAAGGTCA
 A C G T A C G T A C T G A C T G C G T A C G T A C G T A C T A G A C T G C A G T G T A C A C T G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

NFATC1/MA0624.1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAGGTCG
NNTGGAAANN---
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A C T A G A C T G C A G T G T A C A C T G
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGAAAGGTCG--
GGAGAAAGGTGCGA
 A C G T A C G T A C T G A C T G C G T A C G T A C G T A C T A G A C T G C A G T G T A C A C T G A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGAAAGGTCG----
TCTCAAAGGTCACGAG
 A C G T A C G T A C T G A C T G C G T A C G T A C G T A C T A G A C T G C A G T G T A C A C T G A C G T A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

NFATC3/MA0625.1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAGGTCG
AATGGAAAAT---
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A C T A G A C T G C A G T G T A C A C T G
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGAAAGGTCG
TGGAAAA----
 A C G T A C T G A C T G C G T A C G T A C G T A C T A G A C T G C A G T G T A C A C T G
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGAAAGGTCG
TGGAACAGMA-
 A C G T A C T G A C T G C G T A C G T A C G T A C T A G A C T G C A G T G T A C A C T G
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

SPIB/MA0081.1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGAAAGGTCG
AGAGGAA------
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A C T A G A C T G C A G T G T A C A C T G
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGAAAGGTCG----
TCTCAAAGGTCACCTG
 A C G T A C G T A C T G A C T G C G T A C G T A C G T A C T A G A C T G C A G T G T A C A C T G A C G T A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAGGTCG
DCCGGAARYN---
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A C T A G A C T G C A G T G T A C A C T G
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G A C G T A C G T A C G T