Information for 9-GCGGGGTGAC (Motif 15)

A C T G A G T C A C T G A C T G A C T G C T A G A C G T A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A A G T C A G T C A G T C A G T C A C T G A G T C
p-value:1e-6
log p-value:-1.544e+01
Information Content per bp:1.964
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif28.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets56.4 +/- 25.1bp
Average Position of motif in Background51.4 +/- 38.2bp
Strand Bias (log2 ratio + to - strand density)-2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GCGGGGTGAC--
GTGGCGTGACNG
 A C T G A G T C A C T G A C T G A C T G C T A G A C G T A C T G C G T A A G T C A C G T A C G T
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GCGGGGTGAC
ATGGGGTGAT
 A C T G A G T C A C T G A C T G A C T G C T A G A C G T A C T G C G T A A G T C
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

SREBF1/MA0595.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GCGGGGTGAC
GTGGGGTGAT
 A C T G A G T C A C T G A C T G A C T G C T A G A C G T A C T G C G T A A G T C
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

SREBF2/MA0596.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCGGGGTGAC
ATGGGGTGAT
 A C T G A G T C A C T G A C T G A C T G C T A G A C G T A C T G C G T A A G T C
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCGGGGTGAC---
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G C T A G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

PB0107.1_Ascl2_2/Jaspar

Match Rank:6
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------GCGGGGTGAC
NATNGGGNGGGGANAN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G C T A G A C G T A C T G C G T A A G T C
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

PB0157.1_Rara_2/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCGGGGTGAC---
AGAGCGGGGTCAAGTA
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G C T A G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCGGGGTGAC----
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G C T A G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------GCGGGGTGAC
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G C T A G A C G T A C T G C G T A A G T C
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

GLIS2/MA0736.1/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GCGGGGTGAC
CTTCGCGGGGGGTC
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G C T A G A C G T A C T G C G T A A G T C
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C