Information for 2-GRGGGCGCYGYCNVCC (Motif 2)

C A T G C T A G A T C G A C T G A C T G G T A C A C T G G T A C A G C T T A C G A G C T A T G C A C G T T A G C T A G C G T A C
Reverse Opposite:
C A T G A T C G A T C G T G C A T A C G T C G A A T G C C T G A A C T G A G T C A C T G G T A C A G T C T A G C A G T C G T A C
p-value:1e-53
log p-value:-1.236e+02
Information Content per bp:1.664
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif8.36%
Number of Background Sequences with motif292.1
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets52.3 +/- 18.5bp
Average Position of motif in Background48.2 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GRGGGCGCYGYCNVCC
TTGGGGGCGCCCCTAG--
 A C G T A C G T C A T G C T A G A T C G A C T G A C T G G T A C A C T G G T A C A G C T T A C G A G C T A T G C A C G T T A G C T A G C G T A C
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----GRGGGCGCYGYCNVCC
NNNAAGGGGGCGGGNNN----
 A C G T A C G T A C G T A C G T A C G T C A T G C T A G A T C G A C T G A C T G G T A C A C T G G T A C A G C T T A C G A G C T A T G C A C G T T A G C T A G C G T A C
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GRGGGCGCYGYCNVCC
---GGCGCGCT-----
 C A T G C T A G A T C G A C T G A C T G G T A C A C T G G T A C A G C T T A C G A G C T A T G C A C G T T A G C T A G C G T A C
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------GRGGGCGCYGYCNVCC
GCCASCAGGGGGCGCYVNNG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G A T C G A C T G A C T G G T A C A C T G G T A C A G C T T A C G A G C T A T G C A C G T T A G C T A G C G T A C
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G A C G T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GRGGGCGCYGYCNVCC
ANTGCGGGGGCGGN-------
 A C G T A C G T A C G T A C G T A C G T C A T G C T A G A T C G A C T G A C T G G T A C A C T G G T A C A G C T T A C G A G C T A T G C A C G T T A G C T A G C G T A C
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GRGGGCGCYGYCNVCC
RGKGGGCGKGGC-----
 A C G T C A T G C T A G A T C G A C T G A C T G G T A C A C T G G T A C A G C T T A C G A G C T A T G C A C G T T A G C T A G C G T A C
C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GRGGGCGCYGYCNVCC
GGGGGCGGGGCC----
 C A T G C T A G A T C G A C T G A C T G G T A C A C T G G T A C A G C T T A C G A G C T A T G C A C G T T A G C T A G C G T A C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T

KLF14/MA0740.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GRGGGCGCYGYCNVCC
AAGGGGGCGTGGCC----
 A C G T A C G T C A T G C T A G A T C G A C T G A C T G G T A C A C T G G T A C A G C T T A C G A G C T A T G C A C G T T A G C T A G C G T A C
C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GRGGGCGCYGYCNVCC
RGKGGGCGGAGC-----
 A C G T C A T G C T A G A T C G A C T G A C T G G T A C A C T G G T A C A G C T T A C G A G C T A T G C A C G T T A G C T A G C G T A C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GRGGGCGCYGYCNVCC
TGCGTGGGYG---------
 A C G T A C G T A C G T C A T G C T A G A T C G A C T G A C T G G T A C A C T G G T A C A G C T T A C G A G C T A T G C A C G T T A G C T A G C G T A C
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T