Information for 4-TGCTTGAAAGACTGCC (Motif 4)

A C G T A C T G A G T C A C G T A G C T C T A G C T G A C G T A C G T A C T A G G T C A A G T C C G A T A C T G A G T C G T A C
Reverse Opposite:
A C T G A C T G G T A C C G T A A C T G A C G T G A T C A C G T A C G T A G C T A G T C T C G A C G T A A C T G A G T C C G T A
p-value:1e-13
log p-value:-3.058e+01
Information Content per bp:1.894
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.5 +/- 26.9bp
Average Position of motif in Background28.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT3/MA0144.2/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGCTTGAAAGACTGCC
CTTCTGGGAAA------
 A C G T A C G T A C T G A G T C A C G T A G C T C T A G C T G A C G T A C G T A C T A G G T C A A G T C C G A T A C T G A G T C G T A C
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TGCTTGAAAGACTGCC-
---CTGGCAGNCTGCCA
 A C G T A C T G A G T C A C G T A G C T C T A G C T G A C G T A C G T A C T A G G T C A A G T C C G A T A C T G A G T C G T A C A C G T
A C G T A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

PB0006.1_Bcl6b_1/Jaspar

Match Rank:3
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTTGAAAGACTGCC
NNNATTCCTCGAAAGN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G C T C T A G C T G A C G T A C G T A C T A G G T C A A G T C C G A T A C T G A G T C G T A C
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TGCTTGAAAGACTGCC--
--CTTGGCANNNTGCCAA
 A C G T A C T G A G T C A C G T A G C T C T A G C T G A C G T A C G T A C T A G G T C A A G T C C G A T A C T G A G T C G T A C A C G T A C G T
A C G T A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

Bcl6/MA0463.1/Jaspar

Match Rank:5
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TGCTTGAAAGACTGCC
TTTCCTAGAAAGCA----
 A C G T A C G T A C G T A C T G A G T C A C G T A G C T C T A G C T G A C G T A C G T A C T A G G T C A A G T C C G A T A C T G A G T C G T A C
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TGCTTGAAAGACTGCC
TGAGTGACAGSC----
 A C G T A C T G A G T C A C G T A G C T C T A G C T G A C G T A C G T A C T A G G T C A A G T C C G A T A C T G A G T C G T A C
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:7
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:TGCTTGAAAGACTGCC
TTCTTGGAAAN-----
 A C G T A C T G A G T C A C G T A G C T C T A G C T G A C G T A C G T A C T A G G T C A A G T C C G A T A C T G A G T C G T A C
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T A C G T A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:8
Score:0.49
Offset:4
Orientation:forward strand
Alignment:TGCTTGAAAGACTGCC----
----CGACCAACTGCCATGC
 A C G T A C T G A G T C A C G T A G C T C T A G C T G A C G T A C G T A C T A G G T C A A G T C C G A T A C T G A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:9
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:TGCTTGAAAGACTGCC-
---TTGGCATGGTGCCA
 A C G T A C T G A G T C A C G T A G C T C T A G C T G A C G T A C G T A C T A G G T C A A G T C C G A T A C T G A G T C G T A C A C G T
A C G T A C G T A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.47
Offset:11
Orientation:forward strand
Alignment:TGCTTGAAAGACTGCC----
-----------CTGCCCGCA
 A C G T A C T G A G T C A C G T A G C T C T A G C T G A C G T A C G T A C T A G G T C A A G T C C G A T A C T G A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A