Information for 10-GAGCTAGGGG (Motif 16)

A C T G C T G A A C T G A G T C A C G T C G T A C T A G A C T G C A T G A C T G
Reverse Opposite:
A G T C G T A C A G T C G A T C A C G T C G T A C T A G A G T C A G C T T G A C
p-value:1e-7
log p-value:-1.665e+01
Information Content per bp:1.826
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif135.8
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets49.4 +/- 31.8bp
Average Position of motif in Background52.6 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GAGCTAGGGG---
---GGAGGGGGAA
 A C T G C T G A A C T G A G T C A C G T C G T A C T A G A C T G C A T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:2
Score:0.62
Offset:-8
Orientation:reverse strand
Alignment:--------GAGCTAGGGG-----
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A A C T G A G T C A C G T C G T A C T A G A C T G C A T G A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0128.1_Gcm1_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAGCTAGGGG-----
TGCGCATAGGGGAGGAG
 A C G T A C G T A C T G C T G A A C T G A G T C A C G T C G T A C T A G A C T G C A T G A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GAGCTAGGGG-
---CTAATKGV
 A C T G C T G A A C T G A G T C A C G T C G T A C T A G A C T G C A T G A C T G A C G T
A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GAGCTAGGGG-
NNCGTTGCTATGGNN
 A C G T A C G T A C G T A C G T A C T G C T G A A C T G A G T C A C G T C G T A C T A G A C T G C A T G A C T G A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAGCTAGGGG
CAGATAAGGN
 A C T G C T G A A C T G A G T C A C G T C G T A C T A G A C T G C A T G A C T G
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

Gata1/MA0035.3/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAGCTAGGGG
ANAGATAAGAA
 A C G T A C T G C T G A A C T G A G T C A C G T C G T A C T A G A C T G C A T G A C T G
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

Gata4/MA0482.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAGCTAGGGG
NNGAGATAAGA-
 A C G T A C G T A C T G C T G A A C T G A G T C A C G T C G T A C T A G A C T G C A T G A C T G
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GAGCTAGGGG
NAGATAAGNN
 A C T G C T G A A C T G A G T C A C G T C G T A C T A G A C T G C A T G A C T G
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GAGCTAGGGG-
NCCGTTGCTANGNGN
 A C G T A C G T A C G T A C G T A C T G C T G A A C T G A G T C A C G T C G T A C T A G A C T G C A T G A C T G A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G