Information for 8-GCAGTAGGCAGGG (Motif 10)

A C T G A G T C C G T A A C T G C G A T C G T A A C T G A T C G A G T C C G T A C T A G A C T G C T A G
Reverse Opposite:
A G T C A G T C A G T C A C G T A C T G A T G C A G T C A C G T C G T A A G T C A C G T A C T G A G T C
p-value:1e-9
log p-value:-2.231e+01
Information Content per bp:1.939
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.7 +/- 21.9bp
Average Position of motif in Background51.3 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0051.1_Osr2_1/Jaspar

Match Rank:1
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCAGTAGGCAGGG
ATGTACAGTAGCAAAG-
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G A T C G T A A C T G A T C G A G T C C G T A C T A G A C T G C T A G
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCAGTAGGCAGGG--
----AAGGCAAGTGT
 A C T G A G T C C G T A A C T G C G A T C G T A A C T G A T C G A G T C C G T A C T A G A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GCAGTAGGCAGGG
ATTTACAGTAGCAAAA-
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G A T C G T A A C T G A T C G A G T C C G T A C T A G A C T G C T A G
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GCAGTAGGCAGGG
CCACACAGCAGGAGA--
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G A T C G T A A C T G A T C G A G T C C G T A C T A G A C T G C T A G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCAGTAGGCAGGG----
---GTTGCCATGGNAAC
 A C T G A G T C C G T A A C T G C G A T C G T A A C T G A T C G A G T C C G T A C T A G A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

PB0150.1_Mybl1_2/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GCAGTAGGCAGGG
CACGGCAGTTGGTNN--
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G A T C G T A A C T G A T C G A G T C C G T A C T A G A C T G C T A G
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GCAGTAGGCAGGG
CCACACAGCAGGAGA--
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G A T C G T A A C T G A T C G A G T C C G T A C T A G A C T G C T A G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCAGTAGGCAGGG
AGCCTCAGGCA---
 A C G T A C T G A G T C C G T A A C T G C G A T C G T A A C T G A T C G A G T C C G T A C T A G A C T G C T A G
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCAGTAGGCAGGG-
GGGNGGGGGCGGGGC
 A C G T A C T G A G T C C G T A A C T G C G A T C G T A A C T G A T C G A G T C C G T A C T A G A C T G C T A G A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCAGTAGGCAGGG
AGCCTCAGGCA---
 A C G T A C T G A G T C C G T A A C T G C G A T C G T A A C T G A T C G A G T C C G T A C T A G A C T G C T A G
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T