Information for 4-ACTTTASCGWCGSTCC (Motif 3)

G C T A A T G C A G C T A C G T A C G T C T G A A T G C G T A C T C A G G C A T G T A C C T A G A T G C G C A T A T G C A G T C
Reverse Opposite:
A C T G A T C G C G T A T A C G A G T C A C T G C G T A A G T C A C T G T A C G G A C T C G T A C G T A C T G A T A C G C G A T
p-value:1e-27
log p-value:-6.442e+01
Information Content per bp:1.686
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.5 +/- 22.3bp
Average Position of motif in Background62.8 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MTF1/MA0863.1/Jaspar

Match Rank:1
Score:0.51
Offset:2
Orientation:forward strand
Alignment:ACTTTASCGWCGSTCC
--TTTGCACACGGCAC
 G C T A A T G C A G C T A C G T A C G T C T G A A T G C G T A C T C A G G C A T G T A C C T A G A T G C G C A T A T G C A G T C
A C G T A C G T C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

Hnf4a/MA0114.3/Jaspar

Match Rank:2
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----ACTTTASCGWCGSTCC
ATTGGACTTTGACCCC-----
 A C G T A C G T A C G T A C G T A C G T G C T A A T G C A G C T A C G T A C G T C T G A A T G C G T A C T C A G G C A T G T A C C T A G A T G C G C A T A T G C A G T C
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T

PB0179.1_Sp100_2/Jaspar

Match Rank:3
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-ACTTTASCGWCGSTCC
NNTTTANNCGACGNA--
 A C G T G C T A A T G C A G C T A C G T A C G T C T G A A T G C G T A C T C A G G C A T G T A C C T A G A T G C G C A T A T G C A G T C
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.50
Offset:-7
Orientation:reverse strand
Alignment:-------ACTTTASCGWCGSTCC
NNATTGGACTTTNGNN-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A T G C A G C T A C G T A C G T C T G A A T G C G T A C T C A G G C A T G T A C C T A G A T G C G C A T A T G C A G T C
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:5
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:ACTTTASCGWCGSTCC
ANTTTTACGACC----
 G C T A A T G C A G C T A C G T A C G T C T G A A T G C G T A C T C A G G C A T G T A C C T A G A T G C G C A T A T G C A G T C
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.49
Offset:11
Orientation:forward strand
Alignment:ACTTTASCGWCGSTCC-
-----------GCTCCG
 G C T A A T G C A G C T A C G T A C G T C T G A A T G C G T A C T C A G G C A T G T A C C T A G A T G C G C A T A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---ACTTTASCGWCGSTCC
TGGACTTTGNNCTCN----
 A C G T A C G T A C G T G C T A A T G C A G C T A C G T A C G T C T G A A T G C G T A C T C A G G C A T G T A C C T A G A T G C G C A T A T G C A G T C
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---ACTTTASCGWCGSTCC
TGGACTTTGNNCTNTG---
 A C G T A C G T A C G T G C T A A T G C A G C T A C G T A C G T C T G A A T G C G T A C T C A G G C A T G T A C C T A G A T G C G C A T A T G C A G T C
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G A C G T A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:9
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--ACTTTASCGWCGSTCC
GNNATTTGTCGTAANN--
 A C G T A C G T G C T A A T G C A G C T A C G T A C G T C T G A A T G C G T A C T C A G G C A T G T A C C T A G A T G C G C A T A T G C A G T C
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T A C G T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:10
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:ACTTTASCGWCGSTCC
-NTTTTACGAC-----
 G C T A A T G C A G C T A C G T A C G T C T G A A T G C G T A C T C A G G C A T G T A C C T A G A T G C G C A T A T G C A G T C
A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T A C G T A C G T A C G T A C G T