Information for 2-TGATBTCASTDGGCAG (Motif 3)

A C G T A C T G C G T A G C A T A C T G C G A T A T G C C G T A A T G C A C G T C G A T A C T G A C T G G T A C C G T A A T C G
Reverse Opposite:
A T G C A C G T A C T G G T A C G T A C G C A T C G T A A T C G C G A T A T C G C G T A T A G C C G T A A C G T A G T C G T C A
p-value:1e-12
log p-value:-2.954e+01
Information Content per bp:1.711
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.0 +/- 24.8bp
Average Position of motif in Background49.4 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:TGATBTCASTDGGCAG-
-------NNTTGGCANN
 A C G T A C T G C G T A G C A T A C T G C G A T A T G C C G T A A T G C A C G T C G A T A C T G A C T G G T A C C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TGATBTCASTDGGCAG
-----WDNCTGGGCA-
 A C G T A C T G C G T A G C A T A C T G C G A T A T G C C G T A A T G C A C G T C G A T A C T G A C T G G T A C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:TGATBTCASTDGGCAG
--------CTTGGCAA
 A C G T A C T G C G T A G C A T A C T G C G A T A T G C C G T A A T G C A C G T C G A T A C T G A C T G G T A C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:TGATBTCASTDGGCAG
-------NGTGGGCAT
 A C G T A C T G C G T A G C A T A C T G C G A T A T G C C G T A A T G C A C G T C G A T A C T G A C T G G T A C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:TGATBTCASTDGGCAG
-------GGTTGGCAT
 A C G T A C T G C G T A G C A T A C T G C G A T A T G C C G T A A T G C A C G T C G A T A C T G A C T G G T A C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:TGATBTCASTDGGCAG-
--------NTTGGCANN
 A C G T A C T G C G T A G C A T A C T G C G A T A T G C C G T A A T G C A C G T C G A T A C T G A C T G G T A C C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:TGATBTCASTDGGCAG
-------TNNGGGCAG
 A C G T A C T G C G T A G C A T A C T G C G A T A T G C C G T A A T G C A C G T C G A T A C T G A C T G G T A C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.52
Offset:9
Orientation:forward strand
Alignment:TGATBTCASTDGGCAG
---------TTGGCA-
 A C G T A C T G C G T A G C A T A C T G C G A T A T G C C G T A A T G C A C G T C G A T A C T G A C T G G T A C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---TGATBTCASTDGGCAG
NRRTGACGTCAT-------
 A C G T A C G T A C G T A C G T A C T G C G T A G C A T A C T G C G A T A T G C C G T A A T G C A C G T C G A T A C T G A C T G G T A C C G T A A T C G
A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---TGATBTCASTDGGCAG
NGRTGACGTCAY-------
 A C G T A C G T A C G T A C G T A C T G C G T A G C A T A C T G C G A T A T G C C G T A A T G C A C G T C G A T A C T G A C T G G T A C C G T A A T C G
T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T