Information for 10-AAAATGACAC (Motif 19)

C G T A C G T A C T G A C G T A A C G T A C T G C T G A A G T C C G T A A T G C
Reverse Opposite:
A T C G A C G T A C T G G A C T A G T C C G T A A C G T A G C T C G A T A C G T
p-value:1e-8
log p-value:-1.884e+01
Information Content per bp:1.908
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif49.9
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets56.1 +/- 22.3bp
Average Position of motif in Background50.0 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AAAATGACAC------
ATAAATGACACCTATCA
 A C G T C G T A C G T A C T G A C G T A A C G T A C T G C T G A A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AAAATGACAC
-ARNTGACA-
 C G T A C G T A C T G A C G T A A C G T A C T G C T G A A G T C C G T A A T G C
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.69
Offset:3
Orientation:forward strand
Alignment:AAAATGACAC
---TTGACAG
 C G T A C G T A C T G A C G T A A C G T A C T G C T G A A G T C C G T A A T G C
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AAAATGACAC
--CATGAC--
 C G T A C G T A C T G A C G T A A C G T A C T G C T G A A G T C C G T A A T G C
A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AAAATGACAC-
---TTGACAGG
 C G T A C G T A C T G A C G T A A C G T A C T G C T G A A G T C C G T A A T G C A C G T
A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AAAATGACAC-
GAAAMTGAAACT
 A C G T C G T A C G T A C T G A C G T A A C G T A C T G C T G A A G T C C G T A A T G C A C G T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AAAATGACAC-
GAAACTGAAACT
 A C G T C G T A C G T A C T G A C G T A A C G T A C T G C T G A A G T C C G T A A T G C A C G T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AAAATGACAC---
GGAAANTGAAACTNA
 A C G T A C G T C G T A C G T A C T G A C G T A A C G T A C T G C T G A A G T C C G T A A T G C A C G T A C G T A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AAAATGACAC
--RHTGWCAR
 C G T A C G T A C T G A C G T A A C G T A C T G C T G A A G T C C G T A A T G C
A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

YY1/MA0095.2/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAAATGACAC-
CAAGATGGCGGC
 A C G T C G T A C G T A C T G A C G T A A C G T A C T G C T G A A G T C C G T A A T G C A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C